Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: OPUNC03G16540.1

Description

Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase [Source:Projected from Arabidopsis thaliana (AT1G09060) TAIR;Acc:AT1G09060]

Location

Chromosome 3: 14,388,722-14,397,091 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features and maps to 10 oligo probes.

Gene

This transcript is a product of gene OPUNC03G16540 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC03G16540.2	3226	869aa	OPUNC03G16540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KDM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC03G16540.1	2928	869aa	OPUNC03G16540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KDM9	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,928 bps, Translation length: 869 residues

Version

OPUNC03G16540.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.

Transcript: OPUNC03G16540.1

Summary

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Transcript: OPUNC03G16540.1

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