Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC01G01420.2

Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A0E0JDI8]

Location

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features and maps to 6 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC01G01420.1	4167	1388aa	OPUNC01G01420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC01G01420.4	3398	753aa	OPUNC01G01420.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDJ1	-
-	OPUNC01G01420.2	2007	668aa	OPUNC01G01420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDI9	-
-	OPUNC01G01420.3	1968	655aa	OPUNC01G01420.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDJ0	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,007 bps, Translation length: 668 residues

Version

OPUNC01G01420.2

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.