Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: OPUNC08G20170.2

Description

RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0E0LXG8]

Location

About this transcript

This transcript has 16 exons, is annotated with 27 domains and features and maps to 14 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC08G20170.3	3054	603aa	OPUNC08G20170.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LXG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC08G20170.1	2925	603aa	OPUNC08G20170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LXG8	-
-	OPUNC08G20170.2	2904	596aa	OPUNC08G20170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LXG9	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,904 bps, Translation length: 596 residues

Version

OPUNC08G20170.2

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.