Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: OPUNC04G09700.1

Description

histone deacetylase 9 [Source:Projected from Arabidopsis thaliana (AT3G44680) TAIR;Acc:AT3G44680]

Location

About this transcript

This transcript has 15 exons, is annotated with 21 domains and features and maps to 20 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC04G09700.2	1679	449aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC04G09700.3	2039	430aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ82	-
-	OPUNC04G09700.1	1954	430aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KQ82	-

Summary

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Statistics

Exons: 15, Coding exons: 14, Transcript length: 1,954 bps, Translation length: 430 residues

Version

OPUNC04G09700.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.