Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC05G19080.1

Description

Transcription elongation factor spt6 [Source:UniProtKB/TrEMBL;Acc:A0A0E0L483]

Location

About this transcript

This transcript has 19 exons, is annotated with 43 domains and features and maps to 39 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC05G19080.1	7229	1643aa	OPUNC05G19080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L483	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC05G19080.3	6892	1616aa	OPUNC05G19080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L484	-
-	OPUNC05G19080.2	6685	1616aa	OPUNC05G19080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L484	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 7,229 bps, Translation length: 1,643 residues

Version

OPUNC05G19080.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.