Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC04G21990.2

Description

DNA ligase IV [Source:Projected from Arabidopsis thaliana (AT5G57160) TAIR;Acc:AT5G57160]

Location

About this transcript

This transcript has 26 exons, is annotated with 40 domains and features and maps to 22 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC04G21990.2	3843	1280aa	OPUNC04G21990.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KUV9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC04G21990.1	3834	1277aa	OPUNC04G21990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KUV8	-
-	OPUNC04G21990.4	3831	1276aa	OPUNC04G21990.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KUW1	-
-	OPUNC04G21990.3	3723	1240aa	OPUNC04G21990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0KUW0	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,843 bps, Translation length: 1,280 residues

Version

OPUNC04G21990.2

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.