Oryza punctata (Oryza_punctata_v1.2)
Location
About this transcript

This transcript has 5 exons, is annotated with 18 domains and features and maps to 13 oligo probes.

Gene
Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OPUNC05G14790.11577258aa
 
Protein coding
A0A0E0L2M4 Ensembl Canonical
-OPUNC05G14790.21389258aa
 
Protein coding
A0A0E0L2M4 -
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 GCCGCCGACTAACCCTCCCCGCCGGGACCCCGAAATGGACGGAGGCTCCGGCGGGCCGTA     60
       ..................................ATGGACGGAGGCTCCGGCGGGCCGTA     26
       ..................................-M--D--G--G--S--G--G--P--Y      9

                                                                          
    61 CACCTCCCGCACGGCCGAGGAGGTCTTCCGCGACTTCCGCGGCCGCCGCGCCGGCATGAT    120
    27 CACCTCCCGCACGGCCGAGGAGGTCTTCCGCGACTTCCGCGGCCGCCGCGCCGGCATGAT     86
     9 --T--S--R--T--A--E--E--V--F--R--D--F--R--G--R--R--A--G--M--I     29

                                                                          
   121 CAAGGCCCTCACCACCGATGTGGAGAAGTTCTACCAGCTCTGCGACCCCGAAAAGGAGAA    180
    87 CAAGGCCCTCACCACCGATGTGGAGAAGTTCTACCAGCTCTGCGACCCCGAAAAGGAGAA    146
    29 --K--A--L--T--T--D--V--E--K--F--Y--Q--L--C--D--P--E--K--E--N     49

                                                                          
   181 CTTGTGCCTTTATGGATACCCTAATGAAACATGGGAAGTTACCTTGCCTGCTGAGGAAGT    240
   147 CTTGTGCCTTTATGGATACCCTAATGAAACATGGGAAGTTACCTTGCCTGCTGAGGAAGT    206
    49 --L--C--L--Y--G--Y--P--N--E--T--W--E--V--T--L--P--A--E--E--V     69

                                                                          
   241 TCCTCCGGAGATCCCTGAACCAGCTTTAGGAATCAATTTTGCTAGGGACGGCATGAATGA    300
   207 TCCTCCGGAGATCCCTGAACCAGCTTTAGGAATCAATTTTGCTAGGGACGGCATGAATGA    266
    69 --P--P--E--I--P--E--P--A--L--G--I--N--F--A--R--D--G--M--N--E     89

                                                                          
   301 GAAAGATTGGTTGGCACTAGTTGCCGTCCACAGTGATTCATGGCTACTGGCTGTTGCGTT    360
   267 GAAAGATTGGTTGGCACTAGTTGCCGTCCACAGTGATTCATGGCTACTGGCTGTTGCGTT    326
    89 --K--D--W--L--A--L--V--A--V--H--S--D--S--W--L--L--A--V--A--F    109

                                                                          
   361 TTATTTCGCAGCACGATTTGGGTTCGACAAAGAGGCCAGGAGGCGACTCTTCAACATGAT    420
   327 TTATTTCGCAGCACGATTTGGGTTCGACAAAGAGGCCAGGAGGCGACTCTTCAACATGAT    386
   109 --Y--F--A--A--R--F--G--F--D--K--E--A--R--R--R--L--F--N--M--I    129

                                                                          
   421 AAATAACTTGCCTACAATATTTGAAGTTGTGACTGGCGCTGCCAAGAAACAAATGAAGGA    480
   387 AAATAACTTGCCTACAATATTTGAAGTTGTGACTGGCGCTGCCAAGAAACAAATGAAGGA    446
   129 --N--N--L--P--T--I--F--E--V--V--T--G--A--A--K--K--Q--M--K--E    149

                                                                          
   481 GAAGGCGCCCAACAGTACCAACAAGCCCAACAAACCCAGCTCAAAAATGCAACCAAGACC    540
   447 GAAGGCGCCCAACAGTACCAACAAGCCCAACAAACCCAGCTCAAAAATGCAACCAAGACC    506
   149 --K--A--P--N--S--T--N--K--P--N--K--P--S--S--K--M--Q--P--R--P    169

                                                                          
   541 AGAGTCTCATTCAAAGGCTCCAAAGCCACCTGCACCCCCCAAGGATGATGATGAGAGCGG    600
   507 AGAGTCTCATTCAAAGGCTCCAAAGCCACCTGCACCCCCCAAGGATGATGATGAGAGCGG    566
   169 --E--S--H--S--K--A--P--K--P--P--A--P--P--K--D--D--D--E--S--G    189

                                                                          
   601 CGAGGAGTATGCAGACGAGGAGGAGGAGGAGCGCGACAACACCCTGTGCGGATCTTGTGG    660
   567 CGAGGAGTATGCAGACGAGGAGGAGGAGGAGCGCGACAACACCCTGTGCGGATCTTGTGG    626
   189 --E--E--Y--A--D--E--E--E--E--E--R--D--N--T--L--C--G--S--C--G    209

                                                                          
   661 AACAAATGATGGCAAAGATGAGTTTTGGATCTGTTGTGATAGTTGTGAGCGGTGGTACCA    720
   627 AACAAATGATGGCAAAGATGAGTTTTGGATCTGTTGTGATAGTTGTGAGCGGTGGTACCA    686
   209 --T--N--D--G--K--D--E--F--W--I--C--C--D--S--C--E--R--W--Y--H    229

                                                                          
   721 TGGAAAATGCGTGAAGATCACACCTGCTCGAGCCGAGCATATCAAACACTACAAGTGCCC    780
   687 TGGAAAATGCGTGAAGATCACACCTGCTCGAGCCGAGCATATCAAACACTACAAGTGCCC    746
   229 --G--K--C--V--K--I--T--P--A--R--A--E--H--I--K--H--Y--K--C--P    249

                                                                          
   781 AGATTGTGGCAACAAGAGGGCAAGGGCATAGAGACAAGCACAAACAAGCAGCAGCCGGAA    840
   747 AGATTGTGGCAACAAGAGGGCAAGGGCATAG.............................    777
   249 --D--C--G--N--K--R--A--R--A--*-.............................    258

                                                                          
   841 CGGAAACCAGCGCCAAATCGTTGATGTCTGCAGATATGGCCCTAGCTTTCTAGCCCGTAG    900
       ............................................................       
       ............................................................       

                                                                          
   901 ACTTGGTTTTTCATTTCAAATCAAAACACTGTTAATTTAATCGTGCCCCAGCTGTTCGTG    960
       ............................................................       
       ............................................................       

                                                                          
   961 TTGCTCTGACTTTAATTGTGCTTAAAACTCTTGTAGTAATACTAGCTTCATTTCCCTGGT   1020
       ............................................................       
       ............................................................       

                                                                          
  1021 GCGGCTGCCTCTGCAGACATATGTCAAAGACGTTCTTGAATTGAAGGACTCTCTGACCAT   1080
       ............................................................       
       ............................................................       

                                                                          
  1081 TGTTTCTTCACTGTCTAGTCTCGCTCCAGTTCTTGATCTTGGCTTCTTTCTTCACTGCTA   1140
       ............................................................       
       ............................................................       

                                                                          
  1141 TGCTCTTTCTAATTCTTAGCCAATATTTGGACTTGTTTGAAGTTTATATTGGTCAATTGA   1200
       ............................................................       
       ............................................................       

                                                                          
  1201 AGGTGGTATGACCGTATGAGCAGTTGACCACCAGGTTAGATGTTAATATTCGCAGCATTG   1260
       ............................................................       
       ............................................................       

                                                                          
  1261 GATGAATGACATATGAAGTATGCAGTAGACATGACAATATAATGTGTAACAAGATACAAG   1320
       ............................................................       
       ............................................................       

                                                                          
  1321 TGATATGAGTTTTTTTTTATCGTGAATCGGGCGATCCAGAGCCTAATGCAAAACTCACTA   1380
       ............................................................       
       ............................................................       

                                                                          
  1381 ATTCCCCAG                                                      1389
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