Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC08G19290.2

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Location

Chromosome 8: 27,519,844-27,521,202 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features and maps to 8 oligo probes.

Gene

This transcript is a product of gene OPUNC08G19290 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC08G19290.1	540	171aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LX43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC08G19290.2	450	141aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LX44	-

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tacttaatgtgaagattcagcaataagtaattgtcctcactgatgtccag
1	OPUNC08G19290.1.exon1	27,521,202	27,520,999	-	0	204	GTTATTCCAAATATCAGAACAAGCATGAGTACTGCAAGTACTGCACGCTCTAGGAAACGA GGCCATGATGGTTCCAGGCAAAAAGTTGATGTTATTAACTTGGAAACAACCGCTCCAGTG GTGAACACTGGTAACCAGCGTGAGGCTCTGATCCTTAGGGGTACACGGACCTCACCCATC GATGTTGAAGCTCTAGATGATAAA
	Intron 1-2	27,520,998	27,520,090			909	gtaaacttttgctttcttctgtctc..........tcataatatgttctcaccttcgcag
2	OPUNC08G19290.1.exon4	27,520,089	27,519,844	0	0	246	CCGAAAAATGTGGCCCAAACCAGAACGGCCCGTGCCAAGGTTGCTCCAAAGGAACCAACC TTTACCTGTCCTGTGTGTCTGAACAAACTGGACAAGCCATCCACGACAAATTGCGGTCAT ATCTTCTGCGAGAAATGCATCGGAGCATGCCTCAAAGCTCAGAAGAAATGCCCTACTTGT AGGAAGAGTCTAGGGATCAAGGGCTTCCATCGTGTTTACCTCCCTACGCCTGCTGATGAT TATTAG
	3' downstream sequence						tttctgctggcctgaacctcaatagaacttgaacagtagttagttagaca..........

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