Transcript: OPUNC08G05180.3

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC08G05180.1	1323	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LS36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC08G05180.2	1276	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LS36	-
-	OPUNC08G05180.3	864	78aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LS38	-

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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..........tcgccgcaatcaaccaaccaaccacttcctcctcctcctccccccgcgat
CCCCAATCCGATCTCGTAAGTCTCTCCCCCCCCCCCCCCCCCCCCCCCCAGCTTTCGATC
GATTAATCGAATTTGTTGGTGTTTTCGTCTACTCGTCGATCTGAGCAGAGCCGTGAGGGT
TTGTTGCGAGATTGGTGGCGTGCTGTGTTTGGGGTGGGTTGGGGGTTCGATTGGAGTGTT
TTTGAGGCTGATTTTTGTGGTGGTGGTGGTTTGTTGGTTTGCAGGAAAGGTAGGTAGGAA
GGAAGGCAAGGTCGCGCGTGATGGCGAGGAGCTCGTTCAAGCTGGAGCACCCACTCG   
gttcgtctcaattcttctcctcgtt..........ccatgtgttgtgtcgcagaaaggag
GCAGGCTGAGGCCAACCGCATCAGAGAGAAGTATCCCGATAGAATTCCT           
gtaagtacgatggatttttgttgct..........aagcaacttctgtgattaaatatag
GTCATTGTTGAGAAGGCTGAGAGGAGTGACATTCCTGACATTGACAAAAAGAA       
gtcagttctcaatcattttactttt..........atatgttctttttatctatatgcag
GTACCTTGTTCCCGCTGACCTCACGGTTGGACAGTTTGTGTATGTTGTTCGGAAGCGGAT
CAAACTCAGTGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACGCTTCCACCAACAG 
gtacggtaatatgagctctgggaga..........attccttgttgcattgctcctacag
CTGCCCTGATGTCCGCGATCTACGAGGAGAACAAGGATGAGGATGGCTTCCTCTACATGA
CCTACAGCGGGGAGAACACCTTCGGCCTGTTCGTCTGAGTGGTGGCAATAATCAATTCGA
CAATGCCTCGTGTAAATAGGCATCTAAAGAAAAAACCTCTGTATATAATCCGGTCTAGCA
GCATGTTCCCAATCCCTTAGCATCTTATTGTGAAAAAACTATCCAGTGATCATCAAAGCA
CACGGTGCTTAGTACATTAACTGTATGTCCTGTTCTTTCTGTTCAAGAAGTTGCATAATT
GCATTGCTTCAGTGCTCTCTGAAGCATCTATTCTAACAAAGTGAAA              
tccatacttgtgtgttctgtgccatgtaagcttgttctgtatgtgttttt..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tcgccgcaatcaaccaaccaaccacttcctcctcctcctccccccgcgat
1	OPUNC08G05180.3.exon1	4,655,482	4,655,778	-	1	297	CCCCAATCCGATCTCGTAAGTCTCTCCCCCCCCCCCCCCCCCCCCCCCCAGCTTTCGATC GATTAATCGAATTTGTTGGTGTTTTCGTCTACTCGTCGATCTGAGCAGAGCCGTGAGGGT TTGTTGCGAGATTGGTGGCGTGCTGTGTTTGGGGTGGGTTGGGGGTTCGATTGGAGTGTT TTTGAGGCTGATTTTTGTGGTGGTGGTGGTTTGTTGGTTTGCAGGAAAGGTAGGTAGGAA GGAAGGCAAGGTCGCGCGTGATGGCGAGGAGCTCGTTCAAGCTGGAGCACCCACTCG
	Intron 1-2	4,655,779	4,660,629			4,851	gttcgtctcaattcttctcctcgtt..........ccatgtgttgtgtcgcagaaaggag
2	OPUNC08G05180.3.exon2	4,660,630	4,660,678	1	2	49	GCAGGCTGAGGCCAACCGCATCAGAGAGAAGTATCCCGATAGAATTCCT
	Intron 2-3	4,660,679	4,660,772			94	gtaagtacgatggatttttgttgct..........aagcaacttctgtgattaaatatag
3	OPUNC08G05180.3.exon3	4,660,773	4,660,825	2	1	53	GTCATTGTTGAGAAGGCTGAGAGGAGTGACATTCCTGACATTGACAAAAAGAA
	Intron 3-4	4,660,826	4,661,286			461	gtcagttctcaatcattttactttt..........atatgttctttttatctatatgcag
4	OPUNC08G05180.3.exon4	4,661,287	4,661,405	1	-	119	GTACCTTGTTCCCGCTGACCTCACGGTTGGACAGTTTGTGTATGTTGTTCGGAAGCGGAT CAAACTCAGTGCTGAGAAGGCAATCTTCATCTTCGTAAAGAACACGCTTCCACCAACAG
	Intron 4-5	4,661,406	4,661,503			98	gtacggtaatatgagctctgggaga..........attccttgttgcattgctcctacag
5	OPUNC08G05180.3.exon5	4,661,504	4,661,849	-	-	346	CTGCCCTGATGTCCGCGATCTACGAGGAGAACAAGGATGAGGATGGCTTCCTCTACATGA CCTACAGCGGGGAGAACACCTTCGGCCTGTTCGTCTGAGTGGTGGCAATAATCAATTCGA CAATGCCTCGTGTAAATAGGCATCTAAAGAAAAAACCTCTGTATATAATCCGGTCTAGCA GCATGTTCCCAATCCCTTAGCATCTTATTGTGAAAAAACTATCCAGTGATCATCAAAGCA CACGGTGCTTAGTACATTAACTGTATGTCCTGTTCTTTCTGTTCAAGAAGTTGCATAATT GCATTGCTTCAGTGCTCTCTGAAGCATCTATTCTAACAAAGTGAAA
	3' downstream sequence						tccatacttgtgtgttctgtgccatgtaagcttgttctgtatgtgttttt..........

Exons

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Transcript: OPUNC08G05180.3

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