Transcript: OPUNC08G00700.1

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC08G00700.1	1203	400aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LQH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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..........gagggcatcggcggcgagaagcaggcgaagcgaggcgaggcgaggcagcc
ATGGAGGATCTGAGCGTGGAGGAGCTCGCCTCCAATCTCTCCACCTACAAGGAGCAGCTC
CGCGAG                                                      
gtctcgccctaacccctatctatgt..........atgtaatcaaatttgcttactgcag
GTTAGGAAGATTATCAAGGAGAAAAATGATGATCCTGGAATTTCTGAATACCTTGATATG
GAAAAGGAGCTTCAAGAGGTGAGTATCCTGCATGTTGTATGTTATGCTGTTGTGTGCTTT
GTGTTGGTAG                                                  
gtatcaactaattatcagatgccat..........atgacttgatgattttcttcaaaag
GATATTGCTCTTCTTTACTGTCTGAGCCTATTGCTATCGATCCCTTTTTCTTCTTTGTTA
CAAGGAGCCATGCCCAACAAGATATCATGAAAAAGCAGCTTGCAACATTTTTTGGGGCAT
TTAGGTTTTATTGTAACCTTGAAAG                                   
gtgagaaaggttgaatatgtcaatg..........taccctttatcttgattgattgcag
GTCTGTGTCTCATGGTAGAGTACCTCCTTCCGATTTTGGGTGTCGATGCTGCTTCTCTAA
GTTTGAATCACTAAATATGGACATATTTAATGATATTGGGAGGTTAGTTGTG        
gtaattgtgcttaatgtgtttttctgtaataactgcag                      
GTTATCACATTAACAGAAGAGCTTTTGGCAACTGCAAATCAAAGTGGGAATGCCCAGAAT
GATGTAGGTCTATCACCGCCAAATTATTCGGGCAGGCTGCAGTCAGAG            
gtagctttcttcattgttatatttc..........tgctaacatacttatctggttctag
GCACTGGATGACCCTTCGCAATCCCATGAGAAGTTTGCAATTGGGACTAAAGTGCAAGCT
GTGTGGAGTGAAGATGGGGAGTG                                     
gtaggtttcttctaatgcacctatt..........catatttgattagctgaattgttag
GTACAATGCAACAATTGAAGAACTGACAGAAAATGGCTATTATGTAAGCTTTGAGGGCTG
GGGAAACAAAGAAGAG                                            
gtatgctcgtatttggtgattggat..........acagttaatttgctgcctcatatag
GTTGACCCTGGTAATGTAAGATCACTTGAGGAAGAAGCCGCCGATGCTTTGCGTCAAGCT
GAAAAGGAAGCTGAAGCTACCAAAATGGCAATAAAGAGGAAAATTGAACAGGCAGCAACA
TCTGACTTTCAGATGCGTAGCTTACCCACCAAACTCCGTATCGATCCAAATGATCCTGAG
GATGTG                                                      
gtaagttaatccttcttttcttcta..........ttctgactgacctttgtatatgcag
AAAGCCACAAAGCGGAAGAAGATCCATGCATTCAAGTCAAAAGCCCGCTTTGAGCAGCTA
GAATTTGCACAAAATAAGAGGCAGAATGCATGGCAGCAGTTCCAAACAACCAAAGGGAAA
GCTAAAAAG                                                   
gtactctctgccacccaccctaact..........cctgactttggtggttttcattcag
GTCGGGTTCTTTTCCGGTCGCAAAAAGGAGAGCATCTTCAAGTCACCGGATGATCACAGA
GGTAAGGTCGGTGTCACTGGGAGCGGGAAAGGCCTTACCGAGTTCCAGAGAAGGGAGAAG
CACCTCCATCTCAAGGATGGCTCTTCCGATGCATTGGATGAGGAATAA            
accagcttaggcttttagctcgtgagaggtgtatcacaaacaccgccatg..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gagggcatcggcggcgagaagcaggcgaagcgaggcgaggcgaggcagcc
1	OPUNC08G00700.1.exon1	673,620	673,555	0	0	66	ATGGAGGATCTGAGCGTGGAGGAGCTCGCCTCCAATCTCTCCACCTACAAGGAGCAGCTC CGCGAG
	Intron 1-2	673,554	672,278			1,277	gtctcgccctaacccctatctatgt..........atgtaatcaaatttgcttactgcag
2	OPUNC08G00700.1.exon2	672,277	672,148	0	1	130	GTTAGGAAGATTATCAAGGAGAAAAATGATGATCCTGGAATTTCTGAATACCTTGATATG GAAAAGGAGCTTCAAGAGGTGAGTATCCTGCATGTTGTATGTTATGCTGTTGTGTGCTTT GTGTTGGTAG
	Intron 2-3	672,147	672,077			71	gtatcaactaattatcagatgccat..........atgacttgatgattttcttcaaaag
3	OPUNC08G00700.1.exon3	672,076	671,932	1	2	145	GATATTGCTCTTCTTTACTGTCTGAGCCTATTGCTATCGATCCCTTTTTCTTCTTTGTTA CAAGGAGCCATGCCCAACAAGATATCATGAAAAAGCAGCTTGCAACATTTTTTGGGGCAT TTAGGTTTTATTGTAACCTTGAAAG
	Intron 3-4	671,931	671,806			126	gtgagaaaggttgaatatgtcaatg..........taccctttatcttgattgattgcag
4	OPUNC08G00700.1.exon4	671,805	671,694	2	0	112	GTCTGTGTCTCATGGTAGAGTACCTCCTTCCGATTTTGGGTGTCGATGCTGCTTCTCTAA GTTTGAATCACTAAATATGGACATATTTAATGATATTGGGAGGTTAGTTGTG
	Intron 4-5	671,693	671,656			38	gtaattgtgcttaatgtgtttttctgtaataactgcag
5	OPUNC08G00700.1.exon5	671,655	671,548	0	0	108	GTTATCACATTAACAGAAGAGCTTTTGGCAACTGCAAATCAAAGTGGGAATGCCCAGAAT GATGTAGGTCTATCACCGCCAAATTATTCGGGCAGGCTGCAGTCAGAG
	Intron 5-6	671,547	671,341			207	gtagctttcttcattgttatatttc..........tgctaacatacttatctggttctag
6	OPUNC08G00700.1.exon6	671,340	671,258	0	2	83	GCACTGGATGACCCTTCGCAATCCCATGAGAAGTTTGCAATTGGGACTAAAGTGCAAGCT GTGTGGAGTGAAGATGGGGAGTG
	Intron 6-7	671,257	671,163			95	gtaggtttcttctaatgcacctatt..........catatttgattagctgaattgttag
7	OPUNC08G00700.1.exon7	671,162	671,087	2	0	76	GTACAATGCAACAATTGAAGAACTGACAGAAAATGGCTATTATGTAAGCTTTGAGGGCTG GGGAAACAAAGAAGAG
	Intron 7-8	671,086	670,529			558	gtatgctcgtatttggtgattggat..........acagttaatttgctgcctcatatag
8	OPUNC08G00700.1.exon8	670,528	670,343	0	0	186	GTTGACCCTGGTAATGTAAGATCACTTGAGGAAGAAGCCGCCGATGCTTTGCGTCAAGCT GAAAAGGAAGCTGAAGCTACCAAAATGGCAATAAAGAGGAAAATTGAACAGGCAGCAACA TCTGACTTTCAGATGCGTAGCTTACCCACCAAACTCCGTATCGATCCAAATGATCCTGAG GATGTG
	Intron 8-9	670,342	669,870			473	gtaagttaatccttcttttcttcta..........ttctgactgacctttgtatatgcag
9	OPUNC08G00700.1.exon9	669,869	669,741	0	0	129	AAAGCCACAAAGCGGAAGAAGATCCATGCATTCAAGTCAAAAGCCCGCTTTGAGCAGCTA GAATTTGCACAAAATAAGAGGCAGAATGCATGGCAGCAGTTCCAAACAACCAAAGGGAAA GCTAAAAAG
	Intron 9-10	669,740	669,475			266	gtactctctgccacccaccctaact..........cctgactttggtggttttcattcag
10	OPUNC08G00700.1.exon10	669,474	669,307	0	0	168	GTCGGGTTCTTTTCCGGTCGCAAAAAGGAGAGCATCTTCAAGTCACCGGATGATCACAGA GGTAAGGTCGGTGTCACTGGGAGCGGGAAAGGCCTTACCGAGTTCCAGAGAAGGGAGAAG CACCTCCATCTCAAGGATGGCTCTTCCGATGCATTGGATGAGGAATAA
	3' downstream sequence						accagcttaggcttttagctcgtgagaggtgtatcacaaacaccgccatg..........

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Transcript: OPUNC08G00700.1

Exons

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