Oryza punctata (Oryza_punctata_v1.2)
Description

zinc ion binding [Source:Projected from Arabidopsis thaliana (AT5G65740) TAIR;Acc:AT5G65740]

Location
About this transcript

This transcript has 10 exons, is annotated with 14 domains and features and maps to 25 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OPUNC03G29830.31050349aa
 
Protein coding
A0A0E0KIH6 Ensembl Canonical
-OPUNC03G29830.11011336aa
 
Protein coding
A0A0E0KIH4 -
-OPUNC03G29830.4993330aa
 
Protein coding
A0A0E0KIH7 -
-OPUNC03G29830.2927308aa
 
Protein coding
A0A0E0KIH5 -
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........ctttgtcgcctcccccgccgtggggatcccttggcgctctcgagccagcc
1OPUNC03G29830.1.exon132,201,28232,201,16300120
ATGGCACTGCAGGCGACGGCCTCACGCGAGTCCGTGCGCGCGGCCGCGGAAAGAGAGCCG
GAAGGGGAGGGGGAAGCGCCGCGGCGGCCGGCCGCGTTCTACAGCTCGGTGTTCGCGCAG
 Intron 1-232,201,16232,201,06796
gtacgccagctgctcgacgaaatgc..........ttctgtcctttttgtgtgtttgcag
2OPUNC03G29830.1.exon232,201,06632,200,9900277
ATCGAAGAGGTCGGGTGGGAGCGGCTGATGAGCAGCAAGGGTGACGGCGGCGTGTCGTGC
CTGGTCTTCCGCGTCCT                                           
 Intron 2-332,200,98932,200,571419
gtaaggatctctcttctcctgtgtt..........tttgtaatattcttcctggtttcag
3OPUNC03G29830.1.exon332,200,57032,200,40820163
GGATGATCAGGGACGAAACCATTTACTGGAGATCACGCTGCCCATGAACTACCCTTCAAT
TCCTCCTTCCCTTGTGGCGGTATATCCTGCCGGACTTGCGATGCTTCTTTCACACTTTTC
ATGTCATCAGTGGAATGGTAATGCACGTTATGCCATTTACCTT                 
 Intron 3-432,200,40732,200,39315
gtttgcttgttacag                                             
4OPUNC03G29830.1.exon432,200,39232,200,3180075
GATGTTCCTTATCTACCAAAATTACAGTGGTCAAAAGGCTCAAGACTAAAAGATGTTGTC
TGCCAGTTCCAAGAG                                             
 Intron 4-532,200,31732,200,188130
gtatgcgaagagtgttttttttaaa..........gatcttgcccactgtacacaactag
5OPUNC03G29830.1.exon532,200,18732,200,07301115
CACCTGAAGATATTGCAAGATTACTGGTCTATAATGGATGACATTGATAAGGTCCTTTGG
GTTGTTGATCCAACAAAGCCAACCTTTGCTATGTCTCATCGCCGTATAGCTTTAG     
 Intron 5-632,200,07232,199,98291
gtaatgcactttgtttatttttttt..........agcgtgtgttgtcatgcattgctag
6OPUNC03G29830.1.exon632,199,98132,199,9241258
GTGATGATTGCTATCTTTTACTACATGTTAATGCGCGGAAGCCCAGATCATTGCCAGA  
 Intron 6-732,199,92332,199,85569
gtaagttcaatttcattacagactc..........atcgttgatggtcagtttttctcag
7OPUNC03G29830.1.exon732,199,85432,199,7832272
GTGTCGCTTCCTGGGAACAGATGGGAAACTGGACAGATTGATAACTAATTGGAGAAAATA
TCGCAAAAAGTG                                                
 Intron 7-832,199,78232,199,536247
gtatatccttagctttacactacat..........tttagcattttttttctattattag
8OPUNC03G29830.1.exon832,199,53532,199,40221134
GAGTGCAGACAAGAAATTCCATGAAAACCTGTCAACTGTCTTGGATTTCGCTTTGCCTCC
ACCACCTTCAGTCAACATCGAAGATGACGAGCAAGTTGATTGTGGAATATGTTATGCGAA
GCATCTGCCAATTG                                              
 Intron 8-932,199,40132,199,31092
gtgagcagatttattctgtccattt..........aatccttgagtctttgctttggaag
9OPUNC03G29830.1.exon932,199,30932,199,18612124
ATGATGAACTTGGGACTCACAGCGGGGGCACGACAGATTACACATGTGAAAACCCGAGCT
GCAGTAGAGCTTTCCATTCTGTCTGCCTGAGAGACTGGTTACGCGCGATTACTACAACAA
GGCA                                                        
 Intron 9-1032,199,18532,199,063123
gtacgtcaaaatgatcgaacgccca..........attctcacctgttggcacttcacag
10OPUNC03G29830.1.exon1032,199,06232,198,9902073
GTCGTTTGATGTTTTGTTTGGGAACTGCCCCTACTGCAGCGACCCTGTTGCCGTGAAGAT
CACCGACCGCTAG                                               
3' downstream sequence
aacagtcttcagaggcagattttagctaattttaaccactcttgagacca..........