Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC08G00440.1

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Location

Chromosome 8: 417,892-421,182 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features and maps to 8 oligo probes.

Gene

This transcript is a product of gene OPUNC08G00440 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC08G00440.1	1894	606aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0LQE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Pfam	414	515	-	PF12014	-
PROSITE profiles	15	62	F-box domain	PS50181	IPR001810 [Display all genes with this domain]
Pfam	18	54	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
PANTHER	192	557	F-box domain containing protein At5g39450-like	PTHR31370	IPR040275 [Display all genes with this domain]
Superfamily	16	70	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	33	53
Seg	234	247
Alphafold	1	606

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