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    Oryza punctata (Oryza_punctata_v1.2) ▼

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    Transcript: OPUNC06G09660.1

    Description

    Similar to RAD23, isoform I [Source: Projected from Oryza sativa (Os06g0264300)]

    Location

    Chromosome 6: 8,942,820-8,948,899 forward strand.

    About this transcript

    This transcript has 13 exons, is annotated with 37 domains and features and maps to 20 oligo probes.

    Gene

    This transcript is a product of gene OPUNC06G09660 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OPUNC06G09660.21950410aa
     
    Protein coding
    		A0A0E0LA73 Ensembl Canonical
    -OPUNC06G09660.11929410aa
     
    Protein coding
    		A0A0E0LA73 -

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    CDD174-cd01805-
    Gene3D180-3.10.20.90-
    PANTHER1397-PTHR10621-
    Gene3D155205-1.10.8.10-
    Gene3D356402-1.10.8.10-
    SMART277322Heat shock chaperonin-bindingSM00727IPR006636 [Display all genes with this domain]
    Superfamily149206UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
    Superfamily347405UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
    NCBIFAM1407UV excision repair protein Rad23TIGR00601IPR004806 [Display all genes with this domain]
    TIGRFAM1407UV excision repair protein Rad23TIGR00601IPR004806 [Display all genes with this domain]
    Prints307329UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints358374UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints375389UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    Prints390405UV excision repair protein Rad23PR01839IPR004806 [Display all genes with this domain]
    PROSITE profiles160203Ubiquitin-associated domainPS50030IPR015940 [Display all genes with this domain]
    SMART162202Ubiquitin-associated domainSM00165IPR015940 [Display all genes with this domain]
    Pfam163200Ubiquitin-associated domainPF00627IPR015940 [Display all genes with this domain]
    PROSITE profiles361402Ubiquitin-associated domainPS50030IPR015940 [Display all genes with this domain]
    Pfam364399Ubiquitin-associated domainPF00627IPR015940 [Display all genes with this domain]
    SMART364401Ubiquitin-associated domainSM00165IPR015940 [Display all genes with this domain]
    SMART175Ubiquitin-like domainSM00213IPR000626 [Display all genes with this domain]
    PROSITE profiles179Ubiquitin-like domainPS50053IPR000626 [Display all genes with this domain]
    Pfam376Ubiquitin-like domainPF00240IPR000626 [Display all genes with this domain]
    Superfamily192Ubiquitin-like domain superfamilySSF54236IPR029071 [Display all genes with this domain]
    Pfam281336XPC-binding domainPF09280IPR015360 [Display all genes with this domain]
    Gene3D271337XPC-binding domain superfamily1.10.10.540IPR036353 [Display all genes with this domain]
    Superfamily277342XPC-binding domain superfamilySSF101238IPR036353 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite83109
    MobiDBLite83132
    MobiDBLite110128
    MobiDBLite210275
    MobiDBLite214234
    Seg7590
    Seg95148
    Seg210249
    Seg264283
    Alphafold1410

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