Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC06G02420.1

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Location

Chromosome 6: 1,659,476-1,665,527 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 31 domains and features and maps to 15 oligo probes.

Gene

This transcript is a product of gene OPUNC06G02420 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC06G02420.1	2624	806aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L7K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	23	156	-	SSF52402	-
CDD	23	176	-	cd01989	-
Gene3D	423	524	-	3.30.200.20	-
Gene3D	525	735	-	1.10.510.10	-
Superfamily	731	805	-	SSF57850	-
CDD	738	792	-	cd16655	-
PROSITE profiles	452	715	Protein kinase domain	PS50011	IPR000719 [Display all genes with this domain]
SMART	452	715	Protein kinase domain	SM00220	IPR000719 [Display all genes with this domain]
Pfam	457	707	Protein kinase domain	PF00069	IPR000719 [Display all genes with this domain]
PROSITE patterns	458	479	Protein kinase, ATP binding site	PS00107	IPR017441 [Display all genes with this domain]
Superfamily	428	709	Protein kinase-like domain superfamily	SSF56112	IPR011009 [Display all genes with this domain]
Gene3D	20	164	Rossmann-like alpha/beta/alpha sandwich fold	3.40.50.620	IPR014729 [Display all genes with this domain]
PROSITE patterns	570	582	Serine/threonine-protein kinase, active site	PS00108	IPR008271 [Display all genes with this domain]
PROSITE profiles	736	806	U-box domain	PS51698	IPR003613 [Display all genes with this domain]
Pfam	738	804	U-box domain	PF04564	IPR003613 [Display all genes with this domain]
SMART	740	802	U-box domain	SM00504	IPR003613 [Display all genes with this domain]
PANTHER	22	804	U-box domain-containing ubiquitin ligases	PTHR45647	IPR051348 [Display all genes with this domain]
Pfam	23	154	UspA	PF00582	IPR006016 [Display all genes with this domain]
Gene3D	736	806	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	185	208
MobiDBLite	194	208
MobiDBLite	247	267
MobiDBLite	388	411
MobiDBLite	388	425
Seg	1	18
Seg	194	214
Seg	274	293
Seg	361	374
Alphafold	1	806
Ncoils	328	355
Ncoils	361	414

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