Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC05G25440.1

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Location

Chromosome 5: 30,685,550-30,688,110 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 18 domains and features and maps to 13 oligo probes.

Gene

This transcript is a product of gene OPUNC05G25440 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC05G25440.1	2492	582aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L6H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	34	109	-	3.10.20.90	-
Gene3D	114	199	-	3.10.20.90	-
CDD	115	185	-	cd17039	-
PROSITE profiles	260	564	Phosphatidylinositol 3-/4-kinase, catalytic domain	PS50290	IPR000403 [Display all genes with this domain]
Pfam	270	528	Phosphatidylinositol 3-/4-kinase, catalytic domain	PF00454	IPR000403 [Display all genes with this domain]
PANTHER	46	554	Phosphatidylinositol 4-kinase gamma 1-8	PTHR45800	IPR044571 [Display all genes with this domain]
PROSITE profiles	36	108	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
SMART	36	108	Ubiquitin-like domain	SM00213	IPR000626 [Display all genes with this domain]
Pfam	48	108	Ubiquitin-like domain	PF00240	IPR000626 [Display all genes with this domain]
SMART	113	187	Ubiquitin-like domain	SM00213	IPR000626 [Display all genes with this domain]
Pfam	115	187	Ubiquitin-like domain	PF00240	IPR000626 [Display all genes with this domain]
PROSITE profiles	115	191	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
Superfamily	37	109	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]
Superfamily	115	193	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	295	316
Seg	207	216
Seg	342	357
Alphafold	1	582

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