Oryza punctata (Oryza_punctata_v1.2) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 5: 28,537,486-28,539,648 forward strand.
This transcript has 9 exons, is annotated with 15 domains and features and maps to 5 oligo probes.
This transcript is a product of gene OPUNC05G22590 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 52 | 103 | - | SSF57850 | - |
| CDD | 53 | 98 | - | cd16495 | - |
| PANTHER | 1 | 213 | E3 ubiquitin-protein ligase MARCH-like | PTHR23012 | IPR033275 [Display all genes with this domain] |
| Pfam | 104 | 201 | Protein of unknown function DUF3675 | PF12428 | IPR022143 [Display all genes with this domain] |
| PROSITE profiles | 45 | 105 | Zinc finger, RING-CH-type | PS51292 | IPR011016 [Display all genes with this domain] |
| SMART | 52 | 99 | Zinc finger, RING-CH-type | SM00744 | IPR011016 [Display all genes with this domain] |
| Pfam | 53 | 98 | Zinc finger, RING-CH-type | PF12906 | IPR011016 [Display all genes with this domain] |
| Gene3D | 41 | 110 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Phobius | 1 | 155 |
| Phobius | 156 | 178 |
| Phobius | 179 | 183 |
| Phobius | 184 | 206 |
| Phobius | 207 | 240 |
| TMHMM | 178 | 200 |
| Alphafold | 1 | 240 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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