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    Transcript: OPUNC03G03660.1

    Description

    Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein [Source:Projected from Arabidopsis thaliana (AT5G04240) TAIR;Acc:AT5G04240]

    Location

    Chromosome 3: 2,755,369-2,763,615 forward strand.

    About this transcript

    This transcript has 7 exons, is annotated with 42 domains and features and maps to 43 oligo probes.

    Gene

    This transcript is a product of gene OPUNC03G03660 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -OPUNC03G03660.149381498aa
     
    Protein coding
    		A0A0E0K8V5 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER181442-PTHR10694-
    Gene3D22409-2.60.120.650-
    Superfamily229401-SSF51197-
    Gene3D13591437-3.30.160.60-
    Gene3D14381468-3.30.160.60-
    Gene3D14691497-3.30.160.60-
    SMART236405JmjC domainSM00558IPR003347 [Display all genes with this domain]
    PROSITE profiles239405JmjC domainPS51184IPR003347 [Display all genes with this domain]
    Pfam270388JmjC domainPF02373IPR003347 [Display all genes with this domain]
    SMART2768JmjN domainSM00545IPR003349 [Display all genes with this domain]
    PROSITE profiles2869JmjN domainPS51183IPR003349 [Display all genes with this domain]
    Pfam2962JmjN domainPF02375IPR003349 [Display all genes with this domain]
    Superfamily14131447Zinc finger C2H2 superfamilySSF57667IPR036236 [Display all genes with this domain]
    Superfamily14351491Zinc finger C2H2 superfamilySSF57667IPR036236 [Display all genes with this domain]
    PROSITE profiles13881410Zinc finger C2H2-typePS50157IPR013087 [Display all genes with this domain]
    SMART13881410Zinc finger C2H2-typeSM00355IPR013087 [Display all genes with this domain]
    SMART14111435Zinc finger C2H2-typeSM00355IPR013087 [Display all genes with this domain]
    PROSITE profiles14111440Zinc finger C2H2-typePS50157IPR013087 [Display all genes with this domain]
    PROSITE patterns14131435Zinc finger C2H2-typePS00028IPR013087 [Display all genes with this domain]
    SMART14411465Zinc finger C2H2-typeSM00355IPR013087 [Display all genes with this domain]
    PROSITE profiles14411470Zinc finger C2H2-typePS50157IPR013087 [Display all genes with this domain]
    PROSITE patterns14431465Zinc finger C2H2-typePS00028IPR013087 [Display all genes with this domain]
    SMART14711497Zinc finger C2H2-typeSM00355IPR013087 [Display all genes with this domain]
    PROSITE profiles14711498Zinc finger C2H2-typePS50157IPR013087 [Display all genes with this domain]
    PROSITE patterns14731497Zinc finger C2H2-typePS00028IPR013087 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite121
    MobiDBLite920
    MobiDBLite85122
    MobiDBLite95121
    MobiDBLite504562
    MobiDBLite505515
    MobiDBLite521530
    MobiDBLite549558
    MobiDBLite693723
    MobiDBLite12061239
    MobiDBLite12161239
    Seg220
    Seg82121
    Seg442456
    Seg521530
    Seg556571
    Seg13731387

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