Oryza punctata (Oryza_punctata_v1.2) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 38,891,322-38,892,281 forward strand.
This transcript has 1 exon, is annotated with 18 domains and features and maps to 7 oligo probes.
This transcript is a product of gene OPUNC02G34720 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 129 | 191 | - | SSF57850 | - |
| CDD | 140 | 183 | - | cd16461 | - |
| PANTHER | 33 | 313 | RING-H2 finger protein ATL1/ATL16-like | PTHR46913 | IPR044600 [Display all genes with this domain] |
| Pfam | 140 | 183 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 141 | 182 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 141 | 183 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 105 | 188 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 226 | 252 |
| Phobius | 1 | 50 |
| Phobius | 51 | 72 |
| Phobius | 73 | 319 |
| Seg | 15 | 45 |
| Seg | 52 | 68 |
| Seg | 88 | 105 |
| Seg | 213 | 224 |
| Seg | 309 | 315 |
| TMHMM | 51 | 73 |
| Alphafold | 1 | 319 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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