Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC02G25760.1

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Description

Transducin/WD40 repeat-like superfamily protein [Source:Projected from Arabidopsis thaliana (AT5G24520) TAIR;Acc:AT5G24520]

Location

Chromosome 2: 30,712,968-30,714,026 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 15 domains and features and maps to 11 oligo probes.

Gene

This transcript is a product of gene OPUNC02G25760 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC02G25760.1	1059	352aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0K3N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	12	352	WD repeat-containing protein DCAF7-like	PTHR19919	IPR045159 [Display all genes with this domain]
SMART	71	111	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	129	169	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	172	210	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	177	210	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	179	219	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	261	301	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	263	300	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	268	302	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
PROSITE patterns	288	302	WD40 repeat, conserved site	PS00678	IPR019775 [Display all genes with this domain]
Superfamily	27	303	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	76	352	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	3	21
Seg	93	125
Alphafold	1	352

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