Oryza punctata (Oryza_punctata_v1.2) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 1: 43,087,016-43,091,768 forward strand.
This transcript has 5 exons, is annotated with 12 domains and features and maps to 17 oligo probes.
This transcript is a product of gene OPUNC01G40850 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Pfam | 212 | 250 | - | PF13923 | - |
| Superfamily | 212 | 257 | - | SSF57850 | - |
| PANTHER | 1 | 266 | E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 | PTHR47094 | IPR049627 [Display all genes with this domain] |
| SMART | 213 | 250 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 213 | 251 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| PROSITE patterns | 228 | 237 | Zinc finger, RING-type, conserved site | PS00518 | IPR017907 [Display all genes with this domain] |
| Gene3D | 200 | 265 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 30 | 53 |
| MobiDBLite | 35 | 53 |
| Seg | 40 | 55 |
| Seg | 81 | 91 |
| Alphafold | 1 | 268 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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