Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OPUNC01G26090.2

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Location

Chromosome 1: 29,646,917-29,649,534 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features and maps to 28 oligo probes.

Gene

This transcript is a product of gene OPUNC01G26090 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OPUNC01G26090.1	678	225aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JMA2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC01G26090.2	462	153aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JMA3	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
SMART	8	151	-	SM00212	-
PANTHER	30	150	-	PTHR24068	-
PROSITE profiles	5	151	Ubiquitin-conjugating enzyme E2	PS50127	IPR000608 [Display all genes with this domain]
CDD	7	146	Ubiquitin-conjugating enzyme E2	cd00195	IPR000608 [Display all genes with this domain]
Pfam	9	145	Ubiquitin-conjugating enzyme E2	PF00179	IPR000608 [Display all genes with this domain]
PROSITE patterns	78	93	Ubiquitin-conjugating enzyme, active site	PS00183	IPR023313 [Display all genes with this domain]
Gene3D	1	152	Ubiquitin-conjugating enzyme/RWD-like	3.10.110.10	IPR016135 [Display all genes with this domain]
Superfamily	7	151	Ubiquitin-conjugating enzyme/RWD-like	SSF54495	IPR016135 [Display all genes with this domain]

Other features

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Feature type	Start	End
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153
Alphafold	1	153

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