Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: OPUNC05G17170

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Location

Chromosome 5: 24,094,686-24,113,308 forward strand.

About this gene

This gene has 6 transcripts (splice variants) and 56 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC05G17170.4	8875	1995aa	OPUNC05G17170.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3J0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC05G17170.2	9140	1958aa	OPUNC05G17170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3I8	-
-	OPUNC05G17170.1	9044	1958aa	OPUNC05G17170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3I8	-
-	OPUNC05G17170.3	8701	1937aa	OPUNC05G17170.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3I9	-
-	OPUNC05G17170.5	4443	1386aa	OPUNC05G17170.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3J1	-
-	OPUNC05G17170.6	997	238aa	OPUNC05G17170.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L3J2	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data