Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Cultivars
  - Gene tree
  - Orthologues
  - Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: OPUNC01G01420

.

Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A0E0JDI8]

Location

Chromosome 1: 1,024,163-1,042,843 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 77 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC01G01420.1	4167	1388aa	OPUNC01G01420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDI8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC01G01420.4	3398	753aa	OPUNC01G01420.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDJ1	-
-	OPUNC01G01420.2	2007	668aa	OPUNC01G01420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDI9	-
-	OPUNC01G01420.3	1968	655aa	OPUNC01G01420.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0JDJ0	-

.

Cultivars

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data