Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: OPUNC05G15950

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Description

Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:A0A0E0L324]

Location

Chromosome 5: 22,538,804-22,560,320 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 170 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC05G15950.1	2112	703aa	OPUNC05G15950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L324	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC05G15950.2	1542	513aa	OPUNC05G15950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L325	-
-	OPUNC05G15950.3	894	297aa	OPUNC05G15950.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L326	-
-	OPUNC05G15950.4	827	274aa	OPUNC05G15950.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L327	-
-	OPUNC05G15950.5	771	256aa	OPUNC05G15950.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0L328	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data