Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: ONIVA10G13520.1

Description

periodic tryptophan protein 2 [Source:Projected from Arabidopsis thaliana (AT1G15440) TAIR;Acc:AT1G15440]

Location

About this transcript

This transcript has 27 exons, is annotated with 35 domains and features and maps to 111 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	ONIVA10G13520.1	5920	804aa	ONIVA10G13520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0ITM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA10G13520.2	5905	804aa	ONIVA10G13520.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0ITM6	-
-	ONIVA10G13520.4	3874	804aa	ONIVA10G13520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0ITM6	-
-	ONIVA10G13520.3	2683	761aa	ONIVA10G13520.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0ITM5	-

Summary

Statistics

Exons: 27, Coding exons: 6, Transcript length: 5,920 bps, Translation length: 804 residues

Version

ONIVA10G13520.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.