Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ONIVA01G37440.1

Description

Katanin p80 WD40 repeat-containing subunit B1 homolog [Source:UniProtKB/TrEMBL;Acc:A0A0E0FTZ6]

Location

About this transcript

This transcript has 28 exons, is annotated with 53 domains and features and maps to 88 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	ONIVA01G37440.1	6520	1160aa	ONIVA01G37440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FTZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA01G37440.3	3847	409aa	ONIVA01G37440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FTZ9	-
-	ONIVA01G37440.4	3661	409aa	ONIVA01G37440.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FTZ9	-
-	ONIVA01G37440.2	3428	843aa	ONIVA01G37440.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FTZ7	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 6,520 bps, Translation length: 1,160 residues

Version

ONIVA01G37440.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.