Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ONIVA05G20180.2

Description

Protein-tyrosine phosphatase-like, PTPLA [Source:Projected from Arabidopsis thaliana (AT5G59770) TAIR;Acc:AT5G59770]

Location

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features and maps to 55 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	ONIVA05G20180.4	831	276aa	ONIVA05G20180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0HFL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA05G20180.2	693	230aa	ONIVA05G20180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0HFK9	-
-	ONIVA05G20180.3	687	228aa	ONIVA05G20180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0HFL0	-
-	ONIVA05G20180.1	645	214aa	ONIVA05G20180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0HFK8	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 693 bps, Translation length: 230 residues

Version

ONIVA05G20180.2

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.