[["rect",[150,5,159,10],{"title":"Exon: ONIVA11G17490.1.exon1; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 1 ; Last aa: 10 ; Start phase: 0; End phase: 2; Length: 30bp, 10 aa"}],["rect",[157,5,176,10],{"title":"Exon: ONIVA11G17490.1.exon2; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 11 ; Last aa: 34 (1st base); Start phase: 0; End phase: 0; Length: 70bp, 23 1/3 aa"}],["rect",[175,5,212,10],{"title":"Exon: ONIVA11G17490.1.exon3; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 34 (2nd base); Last aa: 81 (2nd base); Start phase: 1; End phase: 1; Length: 142bp, 47 1/3 aa"}],["rect",[211,5,253,10],{"title":"Exon: ONIVA11G17490.1.exon4; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 81 (3rd base); Last aa: 134 (1st base); Start phase: 2; End phase: 0; Length: 158bp, 52 2/3 aa"}],["rect",[251,5,321,10],{"title":"Exon: ONIVA11G17490.1.exon5; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 134 (2nd base); Last aa: 222 ; Start phase: 1; End phase: 2; Length: 266bp, 88 2/3 aa"}],["rect",[319,5,380,10],{"title":"Exon: ONIVA11G17490.2.exon6; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 223 ; Last aa: 299 ; Start phase: 0; End phase: 2; Length: 231bp, 77 aa"}],["rect",[378,5,407,10],{"title":"Exon: ONIVA11G17490.1.exon7; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 300 ; Last aa: 336 (1st base); Start phase: 0; End phase: 0; Length: 109bp, 36 1/3 aa"}],["rect",[405,5,437,10],{"title":"Exon: ONIVA11G17490.1.exon8; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 336 (2nd base); Last aa: 374 ; Start phase: 1; End phase: 2; Length: 116bp, 38 2/3 aa"}],["rect",[435,5,462,10],{"title":"Exon: ONIVA11G17490.1.exon9; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 375 ; Last aa: 407 ; Start phase: 0; End phase: 2; Length: 99bp, 33 aa"}],["rect",[460,5,490,10],{"title":"Exon: ONIVA11G17490.1.exon10; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 408 ; Last aa: 444 (2nd base); Start phase: 0; End phase: 1; Length: 110bp, 36 2/3 aa"}],["rect",[488,5,510,10],{"title":"Exon: ONIVA11G17490.1.exon11; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 444 (3rd base); Last aa: 470 ; Start phase: 2; End phase: 2; Length: 79bp, 26 1/3 aa"}],["rect",[509,5,548,10],{"title":"Exon: ONIVA11G17490.1.exon12; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 471 ; Last aa: 519 ; Start phase: 0; End phase: 2; Length: 147bp, 49 aa"}],["rect",[546,5,568,10],{"title":"Exon: ONIVA11G17490.1.exon13; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 520 ; Last aa: 546 ; Start phase: 0; End phase: 2; Length: 81bp, 27 aa"}],["rect",[567,5,599,10],{"title":"Exon: ONIVA11G17490.1.exon14; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 547 ; Last aa: 586 ; Start phase: 0; End phase: 2; Length: 120bp, 40 aa"}],["rect",[597,5,630,10],{"title":"Exon: ONIVA11G17490.1.exon15; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 587 ; Last aa: 627 ; Start phase: 0; End phase: 2; Length: 123bp, 41 aa"}],["rect",[629,5,650,10],{"title":"Exon: ONIVA11G17490.1.exon16; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 628 ; Last aa: 653 ; Start phase: 0; End phase: 2; Length: 78bp, 26 aa"}],["rect",[648,5,672,10],{"title":"Exon: ONIVA11G17490.1.exon17; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 654 ; Last aa: 683 (2nd base); Start phase: 0; End phase: 1; Length: 89bp, 29 2/3 aa"}],["rect",[671,5,711,10],{"title":"Exon: ONIVA11G17490.2.exon18; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 683 (3rd base); Last aa: 733 ; Start phase: 2; End phase: 2; Length: 151bp, 50 1/3 aa"}],["rect",[710,5,729,10],{"title":"Exon: ONIVA11G17490.1.exon19; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 734 ; Last aa: 756 ; Start phase: 0; End phase: 2; Length: 69bp, 23 aa"}],["rect",[727,5,757,10],{"title":"Exon: ONIVA11G17490.1.exon20; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 757 ; Last aa: 793 ; Start phase: 0; End phase: 2; Length: 111bp, 37 aa"}],["rect",[755,5,771,10],{"title":"Exon: ONIVA11G17490.1.exon21; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 794 ; Last aa: 812 (2nd base); Start phase: 0; End phase: 1; Length: 56bp, 18 2/3 aa"}],["rect",[769,5,817,10],{"title":"Exon: ONIVA11G17490.1.exon22; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 812 (3rd base); Last aa: 871 ; Start phase: 2; End phase: 2; Length: 178bp, 59 1/3 aa"}],["rect",[815,5,843,10],{"title":"Exon: ONIVA11G17490.1.exon23; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 872 ; Last aa: 905 ; Start phase: 0; End phase: 2; Length: 102bp, 34 aa"}],["rect",[841,5,861,10],{"title":"Exon: ONIVA11G17490.1.exon24; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 906 ; Last aa: 929 ; Start phase: 0; End phase: 2; Length: 72bp, 24 aa"}],["rect",[859,5,878,10],{"title":"Exon: ONIVA11G17490.1.exon25; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 930 ; Last aa: 951 ; Start phase: 0; End phase: 2; Length: 66bp, 22 aa"}],["rect",[876,5,895,10],{"title":"Exon: ONIVA11G17490.1.exon26; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 952 ; Last aa: 973 ; Start phase: 0; End phase: 2; Length: 66bp, 22 aa"}],["rect",[893,5,916,10],{"title":"Exon: ONIVA11G17490.1.exon27; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 974 ; Last aa: 1001 ; Start phase: 0; End phase: 2; Length: 84bp, 28 aa"}],["rect",[914,5,945,10],{"title":"Exon: ONIVA11G17490.1.exon28; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 1002 ; Last aa: 1039 ; Start phase: 0; End phase: 2; Length: 114bp, 38 aa"}],["rect",[943,5,964,10],{"title":"Exon: ONIVA11G17490.1.exon29; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 1040 ; Last aa: 1064 ; Start phase: 0; End phase: 2; Length: 75bp, 25 aa"}],["rect",[962,5,986,10],{"title":"Exon: ONIVA11G17490.1.exon30; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 1065 ; Last aa: 1093 ; Start phase: 0; End phase: 2; Length: 87bp, 29 aa"}],["rect",[985,5,997,10],{"title":"Exon: ONIVA11G17490.1.exon31; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA11G17490;r=11:18766291-18781561;t=ONIVA11G17490.2\">11:18766291-18781561</a>; First aa: 1094 ; Last aa: 1107 ; Start phase: 0; End phase: 2; Length: 42bp, 14 aa"}],["rect",[15,5,106,19],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","tDfMIJZC"]}],["rect",[177,20,193,25],{"title":"MobiDB lite; Position: 36-55"}],["rect",[15,20,82,34],{"klass":["label","ejvztXJk"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[150,36,163,41],{"title":"Low complexity (Seg); Position: 1-17"}],["rect",[276,36,286,41],{"title":"Low complexity (Seg); Position: 166-178"}],["rect",[549,36,563,41],{"title":"Low complexity (Seg); Position: 523-540"}],["rect",[15,36,136,50],{"klass":["label","wotKHyi2"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[543,52,562,57],{"title":"Coiled-coils (Ncoils); Position: 515-539"}],["rect",[15,52,142,66],{"klass":["label","PbzAbvc8"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[150,68,996,73],{"title":"AFDB-ENSP mappings; Position: 1-1106"}],["rect",[15,68,124,82],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","ItnPjLK4"]}],["rect",[295,84,552,98],{"title":"Superfamily SSF54001; Positions: 191-526; Interpro: IPR038765; Papain-like cysteine peptidase superfamily","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19231365;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_superfamily;translation_id=45037"}],["rect",[189,84,291,98],{"title":"Superfamily SSF49599; Positions: 52-184","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19231367;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_superfamily;translation_id=45037"}],["rect",[15,84,82,98],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","i5pBWunS"]}],["rect",[192,126,289,140],{"title":"SMART SM00061; Positions: 56-157; Interpro: IPR002083; MATH/TRAF domain","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19741915;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_smart;translation_id=45037"}],["rect",[15,126,46,140],{"klass":["label","5LIoKqLy"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[193,148,290,162],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996171;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfam;translation_id=45037","title":"Pfam PF22486; Positions: 57-176; Interpro: IPR002083; MATH/TRAF domain"}],["rect",[608,148,969,162],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996169;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfam;translation_id=45037","title":"Pfam PF12436; Positions: 600-866; Interpro: IPR024729; Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain"}],["rect",[299,167,612,181],{"title":"Pfam PF00443; Positions: 196-434; Interpro: IPR001394; Peptidase C19, ubiquitin carboxyl-terminal hydrolase","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996176;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfam;translation_id=45037"}],["rect",[819,167,1114,181],{"title":"Pfam PF14533; Positions: 876-1084; Interpro: IPR029346; Ubiquitin carboxyl-terminal hydrolase, C-terminal","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996180;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfam;translation_id=45037"}],["rect",[15,148,40,162],{"klass":["label","6I5QxjuQ"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[299,190,532,204],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996192;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfscan;translation_id=45037","title":"PROSITE profiles PS50235; Positions: 196-499; Interpro: IPR028889; Ubiquitin specific protease domain"}],["rect",[191,190,288,204],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996188;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_pfscan;translation_id=45037","title":"PROSITE profiles PS50144; Positions: 54-176; Interpro: IPR002083; MATH/TRAF domain"}],["rect",[15,190,112,204],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","NSiLcWpW"]}],["rect",[300,232,559,246],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996164;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_scanprosite;translation_id=45037","title":"PROSITE patterns PS00972; Positions: 197-212; Interpro: IPR018200; Ubiquitin specific protease, conserved site"}],["rect",[15,232,112,246],{"klass":["label","Pk3lT0sI"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[232,254,544,268],{"title":"PANTHER PTHR24006; Positions: 108-515; Interpro: IPR050164; Ubiquitin carboxyl-terminal hydrolases","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19996185;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_hmmpanther;translation_id=45037"}],["rect",[15,254,58,268],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","IOFNZ3fa"]}],["rect",[189,276,297,290],{"title":"Gene3D 2.60.210.10; Positions: 52-192; Interpro: IPR008974; TRAF-like","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19231351;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_gene3d;translation_id=45037"}],["rect",[297,276,533,290],{"title":"Gene3D 3.90.70.10; Positions: 193-500","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19231350;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_gene3d;translation_id=45037"}],["rect",[654,276,830,290],{"title":"Gene3D 3.10.20.90; Positions: 660-889","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19231362;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_gene3d;translation_id=45037"}],["rect",[15,276,52,290],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","uBBTZ9Zk"]}],["rect",[298,318,533,332],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19613870;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_cdd;translation_id=45037","title":"CDD cd02659; Positions: 194-501"}],["rect",[192,318,289,332],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA11G17490;pf_id=19613865;r=11:18766291-18781561;t=ONIVA11G17490.2;track=domain_cdd;translation_id=45037","title":"CDD cd00121; Positions: 56-169; Interpro: IPR002083; MATH/TRAF domain"}],["rect",[15,318,34,332],{"klass":["label","UqWNJJ2s"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[15,360,70,374],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","GMxrKsQz"]}]]
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the TIGRFAM database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein fingerprints (groups of conserved motifs) from the PRINTS database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track