[["rect",[150,5,288,10],{"title":"Exon: ONIVA07G13600.1.exon1; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1 ; Last aa: 203 ; Start phase: 0; End phase: 2; Length: 609bp, 203 aa"}],["rect",[286,5,344,10],{"title":"Exon: ONIVA07G13600.1.exon2; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 204 ; Last aa: 287 ; Start phase: 0; End phase: 2; Length: 252bp, 84 aa"}],["rect",[343,5,383,10],{"title":"Exon: ONIVA07G13600.1.exon3; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 288 ; Last aa: 344 ; Start phase: 0; End phase: 2; Length: 171bp, 57 aa"}],["rect",[381,5,394,10],{"title":"Exon: ONIVA07G13600.1.exon4; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 345 ; Last aa: 361 ; Start phase: 0; End phase: 2; Length: 51bp, 17 aa"}],["rect",[392,5,415,10],{"title":"Exon: ONIVA07G13600.1.exon5; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 362 ; Last aa: 392 ; Start phase: 0; End phase: 2; Length: 93bp, 31 aa"}],["rect",[413,5,436,10],{"title":"Exon: ONIVA07G13600.1.exon6; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 393 ; Last aa: 424 ; Start phase: 0; End phase: 2; Length: 96bp, 32 aa"}],["rect",[435,5,448,10],{"title":"Exon: ONIVA07G13600.1.exon7; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 425 ; Last aa: 441 ; Start phase: 0; End phase: 2; Length: 51bp, 17 aa"}],["rect",[446,5,474,10],{"title":"Exon: ONIVA07G13600.1.exon8; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 442 ; Last aa: 481 (2nd base); Start phase: 0; End phase: 1; Length: 119bp, 39 2/3 aa"}],["rect",[472,5,499,10],{"title":"Exon: ONIVA07G13600.1.exon9; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 481 (3rd base); Last aa: 517 ; Start phase: 2; End phase: 2; Length: 109bp, 36 1/3 aa"}],["rect",[497,5,527,10],{"title":"Exon: ONIVA07G13600.1.exon10; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 518 ; Last aa: 558 ; Start phase: 0; End phase: 2; Length: 123bp, 41 aa"}],["rect",[525,5,543,10],{"title":"Exon: ONIVA07G13600.1.exon11; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 559 ; Last aa: 582 ; Start phase: 0; End phase: 2; Length: 72bp, 24 aa"}],["rect",[541,5,559,10],{"title":"Exon: ONIVA07G13600.1.exon12; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 583 ; Last aa: 606 ; Start phase: 0; End phase: 2; Length: 72bp, 24 aa"}],["rect",[557,5,574,10],{"title":"Exon: ONIVA07G13600.1.exon13; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 607 ; Last aa: 629 (1st base); Start phase: 0; End phase: 0; Length: 67bp, 22 1/3 aa"}],["rect",[572,5,606,10],{"title":"Exon: ONIVA07G13600.1.exon14; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 629 (2nd base); Last aa: 676 ; Start phase: 1; End phase: 2; Length: 143bp, 47 2/3 aa"}],["rect",[604,5,622,10],{"title":"Exon: ONIVA07G13600.1.exon15; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 677 ; Last aa: 700 ; Start phase: 0; End phase: 2; Length: 72bp, 24 aa"}],["rect",[620,5,651,10],{"title":"Exon: ONIVA07G13600.1.exon16; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 701 ; Last aa: 743 ; Start phase: 0; End phase: 2; Length: 129bp, 43 aa"}],["rect",[649,5,686,10],{"title":"Exon: ONIVA07G13600.1.exon17; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 744 ; Last aa: 795 ; Start phase: 0; End phase: 2; Length: 156bp, 52 aa"}],["rect",[684,5,712,10],{"title":"Exon: ONIVA07G13600.1.exon18; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 796 ; Last aa: 833 ; Start phase: 0; End phase: 2; Length: 114bp, 38 aa"}],["rect",[710,5,734,10],{"title":"Exon: ONIVA07G13600.1.exon19; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 834 ; Last aa: 866 ; Start phase: 0; End phase: 2; Length: 99bp, 33 aa"}],["rect",[732,5,751,10],{"title":"Exon: ONIVA07G13600.1.exon20; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 867 ; Last aa: 892 ; Start phase: 0; End phase: 2; Length: 78bp, 26 aa"}],["rect",[750,5,782,10],{"title":"Exon: ONIVA07G13600.1.exon21; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 893 ; Last aa: 937 ; Start phase: 0; End phase: 2; Length: 135bp, 45 aa"}],["rect",[780,5,798,10],{"title":"Exon: ONIVA07G13600.1.exon22; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 938 ; Last aa: 962 ; Start phase: 0; End phase: 2; Length: 75bp, 25 aa"}],["rect",[797,5,824,10],{"title":"Exon: ONIVA07G13600.1.exon23; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 963 ; Last aa: 1001 (1st base); Start phase: 0; End phase: 0; Length: 115bp, 38 1/3 aa"}],["rect",[822,5,907,10],{"title":"Exon: ONIVA07G13600.1.exon24; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1001 (2nd base); Last aa: 1124 ; Start phase: 1; End phase: 2; Length: 371bp, 123 2/3 aa"}],["rect",[906,5,924,10],{"title":"Exon: ONIVA07G13600.1.exon26; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1125 ; Last aa: 1148 ; Start phase: 0; End phase: 2; Length: 72bp, 24 aa"}],["rect",[922,5,952,10],{"title":"Exon: ONIVA07G13600.1.exon27; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1149 ; Last aa: 1191 ; Start phase: 0; End phase: 2; Length: 129bp, 43 aa"}],["rect",[951,5,979,10],{"title":"Exon: ONIVA07G13600.1.exon28; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1192 ; Last aa: 1230 ; Start phase: 0; End phase: 2; Length: 117bp, 39 aa"}],["rect",[977,5,997,10],{"title":"Exon: ONIVA07G13600.1.exon29; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA07G13600;r=7:13841953-13852596;t=ONIVA07G13600.2\">7:13841953-13852596</a>; First aa: 1231 ; Last aa: 1257 ; Start phase: 0; End phase: 2; Length: 81bp, 27 aa"}],["rect",[15,5,106,19],{"klass":["label","RUhXs58F"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[150,20,157,25],{"title":"MobiDB lite; Position: 1-10"}],["rect",[150,20,233,25],{"title":"MobiDB lite; Position: 1-122"}],["rect",[189,20,204,25],{"title":"MobiDB lite; Position: 59-80"}],["rect",[204,20,211,25],{"title":"MobiDB lite; Position: 81-90"}],["rect",[211,20,233,25],{"title":"MobiDB lite; Position: 91-122"}],["rect",[863,20,903,25],{"title":"MobiDB lite; Position: 1060-1119"}],["rect",[958,20,981,25],{"title":"MobiDB lite; Position: 1202-1234"}],["rect",[960,20,970,25],{"title":"MobiDB lite; Position: 1205-1218"}],["rect",[15,20,82,34],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","K5ffGv3J"]}],["rect",[189,36,243,41],{"title":"Low complexity (Seg); Position: 58-138"}],["rect",[246,36,257,41],{"title":"Low complexity (Seg); Position: 144-158"}],["rect",[616,36,625,41],{"title":"Low complexity (Seg); Position: 694-705"}],["rect",[868,36,876,41],{"title":"Low complexity (Seg); Position: 1068-1079"}],["rect",[879,36,889,41],{"title":"Low complexity (Seg); Position: 1084-1097"}],["rect",[894,36,901,41],{"title":"Low complexity (Seg); Position: 1106-1115"}],["rect",[15,36,136,50],{"klass":["label","9Am6j3dq"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[150,52,996,57],{"title":"AFDB-ENSP mappings; Position: 1-1256"}],["rect",[15,52,124,66],{"klass":["label","XcC8ARgj"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[492,68,799,82],{"title":"Superfamily SSF52540; Positions: 509-941; Interpro: IPR027417; P-loop containing nucleoside triphosphate hydrolase","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645179;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_superfamily;translation_id=31946"}],["rect",[15,68,82,82],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","Cujp005G"]}],["rect",[563,90,774,104],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952333;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfam;translation_id=31946","title":"Pfam PF13086; Positions: 614-715; Interpro: IPR041677; DNA2/NAM7 helicase, helicase domain"}],["rect",[258,109,565,123],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952332;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfam;translation_id=31946","title":"Pfam PF09416; Positions: 162-315; Interpro: IPR018999; RNA helicase UPF1, Cys/His rich zinc-binding domain"}],["rect",[637,109,848,123],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952336;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfam;translation_id=31946","title":"Pfam PF13087; Positions: 724-920; Interpro: IPR041679; DNA2/NAM7 helicase-like, C-terminal"}],["rect",[396,128,565,142],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952334;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfam;translation_id=31946","title":"Pfam PF18141; Positions: 367-456; Interpro: IPR040812; RNA helicase UPF1, 1B domain"}],["rect",[494,147,645,161],{"title":"Pfam PF04851; Positions: 512-582; Interpro: IPR006935; Helicase/UvrB, N-terminal","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952335;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfam;translation_id=31946"}],["rect",[15,90,40,104],{"klass":["label","55eJ5iN3"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[500,162,765,176],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645160;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfscan;translation_id=31946","title":"PROSITE profiles PS51192; Positions: 521-653; Interpro: IPR014001; Helicase superfamily 1/2, ATP-binding domain"}],["rect",[254,181,561,195],{"title":"PROSITE profiles PS51997; Positions: 156-315; Interpro: IPR018999; RNA helicase UPF1, Cys/His rich zinc-binding domain","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645165;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_pfscan;translation_id=31946"}],["rect",[15,162,112,176],{"klass":["label","GErvNiur"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[308,204,795,218],{"title":"PANTHER PTHR10887; Positions: 236-958; Interpro: IPR045055; DNA2/NAM7-like helicase","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20205285;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_hmmpanther;translation_id=31946"}],["rect",[15,204,58,218],{"klass":["label","7a7ysb3d"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[552,226,631,240],{"title":"Gene3D 6.10.140.1240; Positions: 598-650","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645193;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_gene3d;translation_id=31946"}],["rect",[470,245,795,259],{"title":"Gene3D 3.40.50.300; Positions: 476-958; Interpro: IPR027417; P-loop containing nucleoside triphosphate hydrolase","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645188;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_gene3d;translation_id=31946"}],["rect",[397,226,464,240],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20645207;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_gene3d;translation_id=31946","title":"Gene3D 2.40.30.230; Positions: 368-456"}],["rect",[15,226,52,240],{"klass":["label","Etntal1v"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[494,268,653,282],{"title":"CDD cd18039; Positions: 512-747","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952329;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_cdd;translation_id=31946"}],["rect",[653,268,876,282],{"title":"CDD cd18808; Positions: 748-937; Interpro: IPR047187; Upf1-like, C-terminal helicase domain","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952331;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_cdd;translation_id=31946"}],["rect",[259,287,566,301],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952330;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_cdd;translation_id=31946","title":"CDD cd21400; Positions: 163-285; Interpro: IPR018999; RNA helicase UPF1, Cys/His rich zinc-binding domain"}],["rect",[397,306,566,320],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA07G13600;pf_id=20952328;r=7:13841953-13852596;t=ONIVA07G13600.2;track=domain_cdd;translation_id=31946","title":"CDD cd21407; Positions: 368-455; Interpro: IPR040812; RNA helicase UPF1, 1B domain"}],["rect",[15,268,34,282],{"klass":["label","30RQh8RG"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[15,321,70,335],{"klass":["label","8RQJo5SE"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}]]
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the PROSITE patterns database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the TIGRFAM database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the SMART database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein fingerprints (groups of conserved motifs) from the PRINTS database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track