[["rect",[150,5,173,10],{"title":"Exon: ONIVA01G16410.1.exon1; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 1 ; Last aa: 14 (2nd base); Start phase: 0; End phase: 1; Length: 41bp, 13 2/3 aa"}],["rect",[171,5,373,10],{"title":"Exon: ONIVA01G16410.1.exon2; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 14 (3rd base); Last aa: 135 ; Start phase: 2; End phase: 2; Length: 364bp, 121 1/3 aa"}],["rect",[370,5,399,10],{"title":"Exon: ONIVA01G16410.1.exon3; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 136 ; Last aa: 152 (1st base); Start phase: 0; End phase: 0; Length: 49bp, 16 1/3 aa"}],["rect",[396,5,445,10],{"title":"Exon: ONIVA01G16410.1.exon4; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 152 (2nd base); Last aa: 180 (1st base); Start phase: 1; End phase: 0; Length: 84bp, 28 aa"}],["rect",[442,5,502,10],{"title":"Exon: ONIVA01G16410.1.exon5; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 180 (2nd base); Last aa: 214 ; Start phase: 1; End phase: 2; Length: 104bp, 34 2/3 aa"}],["rect",[499,5,549,10],{"title":"Exon: ONIVA01G16410.1.exon6; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 215 ; Last aa: 243 ; Start phase: 0; End phase: 2; Length: 87bp, 29 aa"}],["rect",[547,5,579,10],{"title":"Exon: ONIVA01G16410.1.exon7; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 244 ; Last aa: 261 ; Start phase: 0; End phase: 2; Length: 54bp, 18 aa"}],["rect",[576,5,631,10],{"title":"Exon: ONIVA01G16410.1.exon8; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 262 ; Last aa: 293 ; Start phase: 0; End phase: 2; Length: 96bp, 32 aa"}],["rect",[628,5,700,10],{"title":"Exon: ONIVA01G16410.1.exon9; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 294 ; Last aa: 336 (2nd base); Start phase: 0; End phase: 1; Length: 128bp, 42 2/3 aa"}],["rect",[697,5,770,10],{"title":"Exon: ONIVA01G16410.1.exon10; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 336 (3rd base); Last aa: 378 ; Start phase: 2; End phase: 2; Length: 127bp, 42 1/3 aa"}],["rect",[767,5,803,10],{"title":"Exon: ONIVA01G16410.1.exon11; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 379 ; Last aa: 398 ; Start phase: 0; End phase: 2; Length: 60bp, 20 aa"}],["rect",[800,5,861,10],{"title":"Exon: ONIVA01G16410.1.exon12; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 399 ; Last aa: 434 ; Start phase: 0; End phase: 2; Length: 108bp, 36 aa"}],["rect",[859,5,915,10],{"title":"Exon: ONIVA01G16410.1.exon13; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 435 ; Last aa: 468 (2nd base); Start phase: 0; End phase: 1; Length: 101bp, 33 2/3 aa"}],["rect",[913,5,945,10],{"title":"Exon: ONIVA01G16410.1.exon14; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 468 (3rd base); Last aa: 485 ; Start phase: 2; End phase: 2; Length: 52bp, 17 1/3 aa"}],["rect",[942,5,999,10],{"title":"Exon: ONIVA01G16410.1.exon15; Location: <a href=\"/Oryza_nivara/Location/View?db=core;g=ONIVA01G16410;r=1:13403791-13409599;t=ONIVA01G16410.1\">1:13403791-13409599</a>; First aa: 486 ; Last aa: 518 ; Start phase: 0; End phase: 2; Length: 99bp, 33 aa"}],["rect",[15,5,106,19],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","Oj52gLSR"]}],["rect",[272,20,306,25],{"title":"Coiled-coils (Ncoils); Position: 75-95"}],["rect",[15,20,142,34],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","kzoRNDvo"]}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[151,36,995,41],{"title":"AFDB-ENSP mappings; Position: 1-517"}],["rect",[15,36,124,50],{"klass":["label","fzBYe0ql"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[494,52,994,66],{"title":"Superfamily SSF50978; Positions: 211-516; Interpro: IPR036322; WD40-repeat-containing domain superfamily","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467962;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_superfamily;translation_id=2184"}],["rect",[15,52,82,66],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","2kqzePfb"]}],["rect",[167,74,282,88],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20468134;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_smart;translation_id=2184","title":"SMART SM00667; Positions: 11-43; Interpro: IPR006594; LIS1 homology motif"}],["rect",[223,93,386,107],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20468142;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_smart;translation_id=2184","title":"SMART SM00668; Positions: 45-97; Interpro: IPR006595; CTLH, C-terminal LisH motif"}],["rect",[488,74,994,88],{"title":"SMART SM00320; Positions: 207-516; Interpro: IPR001680; WD40 repeat","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20468129;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_smart;translation_id=2184"}],["rect",[15,74,46,88],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","Irg1HSFH"]}],["rect",[530,116,775,130],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20468148;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_prints;translation_id=2184","title":"Prints PR00320; Positions: 233-382; Interpro: IPR020472; G-protein beta WD-40 repeat"}],["rect",[15,116,52,130],{"klass":["label","JwiX5cPL"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[514,132,992,146],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20758515;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfam;translation_id=2184","title":"Pfam PF00400; Positions: 223-515; Interpro: IPR001680; WD40 repeat"}],["rect",[167,132,402,146],{"title":"Pfam PF17814; Positions: 11-41; Interpro: IPR054532; TPL/SMU1, LisH-like dimerisation domain","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20758491;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfam;translation_id=2184"}],["rect",[15,132,40,146],{"klass":["label","N2X112Bx"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[519,154,996,168],{"title":"PROSITE profiles PS50082; Positions: 226-517; Interpro: IPR001680; WD40 repeat","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467919;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfscan;translation_id=2184"}],["rect",[167,154,282,168],{"title":"PROSITE profiles PS50896; Positions: 11-43; Interpro: IPR006594; LIS1 homology motif","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467829;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfscan;translation_id=2184"}],["rect",[223,173,386,187],{"title":"PROSITE profiles PS50897; Positions: 45-97; Interpro: IPR006595; CTLH, C-terminal LisH motif","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467902;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfscan;translation_id=2184"}],["rect",[581,173,996,187],{"title":"PROSITE profiles PS50294; Positions: 264-517","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467884;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_pfscan;translation_id=2184"}],["rect",[15,154,112,168],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","D5EaTMrs"]}],["rect",[751,196,914,210],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467972;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_scanprosite;translation_id=2184","title":"PROSITE patterns PS00678; Positions: 368-382; Interpro: IPR019775; WD40 repeat, conserved site"}],["rect",[15,196,112,210],{"alt":"Oryza nivara (Oryza sativa f. spontanea)","klass":["label","vUUmcPXV"]}],["rect",[158,218,992,232],{"title":"PANTHER PTHR22848; Positions: 5-515; Interpro: IPR045184; WD40 repeat-containing protein SMU1","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20170780;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_hmmpanther;translation_id=2184"}],["rect",[15,218,58,232],{"klass":["label","O8x91P80"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[467,240,996,254],{"title":"Gene3D 2.130.10.10; Positions: 194-517; Interpro: IPR015943; WD40/YVTN repeat-like-containing domain superfamily","href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467989;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_gene3d;translation_id=2184"}],["rect",[15,240,52,254],{"klass":["label","wA3DourB"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[514,262,994,276],{"href":"/Oryza_nivara/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=ONIVA01G16410;pf_id=20467957;r=1:13403791-13409599;t=ONIVA01G16410.1;track=domain_cdd;translation_id=2184","title":"CDD cd00200; Positions: 223-516"}],["rect",[15,262,34,276],{"klass":["label","LPuN0KCV"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}],["rect",[15,284,70,298],{"klass":["label","m6EyBppI"],"alt":"Oryza nivara (Oryza sativa f. spontanea)"}]]
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Protein domains and motifs from the TIGRFAM database.
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NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
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