Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: ONIVA02G35810.1

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Description

Pentatricopeptide repeat (PPR) superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G73400) TAIR;Acc:AT1G73400]

Location

Chromosome 2: 31,114,926-31,126,683 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 21 domains and features and maps to 73 oligo probes.

Gene

This transcript is a product of gene ONIVA02G35810 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ONIVA02G35810.2	1812	603aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0GD87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA02G35810.1	2972	430aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0GD86	-

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ctcgcctcccgccgccgaccacgcgcgttatctgcatgccaagttgccga
1	ONIVA02G35810.1.exon1	31,114,926	31,116,990	-	-	2,065	GCTAGGATGCACGCGCACCAGCACCAGCACGCGCTGCTCGCGGCGCTCCTCGCGTGCGCG CTCGCGGCGTCGTCGTCGACGGCCGGAGCGCAGCCGGCGGGGCAGCAGGGGTATGCCTAC GGCGACGTGTCCGGGCAGCAGGTGCACGTCAGCACGACGATGATCGTGCTGCTGGCCGCC GTCGTCGGGGTTTTCCTGTTCATCGCGATCTCCACCATCTACCTCCGCCACTGCACCGGT TACGACCCCGCGACGGAGGGCGGCGGCGTCGGCGGGCGCCGTTCCATGATCCTCCCTGCC AACAGCTTCGTCTCGAGGCGGCAGCGGCGGCCGCGCGGGCTCGACTCGTCGGTGGTCCGG ATGTTCCCCACCATGAAGTACGCCGAGGCGAAGGCGCTGCGGGTGGGGAAGGTCGCCGGC GCTGCGCTGGAGTGCGCGGTGTGCCTCAGCGAGTTCGAGGACGACGAGATGCTCAGGTTC CTGCCCAAGTGCAGCCACGCCTTCCACCCGGACTGCATCGGCCAGTGGCTCGCCAGCCAC GTGACCTGCCCCGTCTGCCGCCGCAATCTCGACCCTAACAAGGACACCACCGAAGAGGTG ATCATCCCGGCCACCGCCGCGGCCGATCCGAACAGCACCTCCAGTGAAATAGTTGTGATA CGGCAAGAAGACGGGGCGCACCCAGCAGCCGTGGTGATCGACGTGGTCACCGAGGAGGAC GACGAGGAGCGGAGGAAGGAGGAGCTAGAGCTTCAGGCGATAGGCACCCAGCTCCGCGCG ATGCGGTCACGGTCGGGGCTGCGGCCAAAGACGTCGGCGGCGAAGCTTCCCCGGTCGCAC TCCACTGGCCACTCCCTCGCCGTCCGGCTCGACGGCGACCTAGAGCGGTACACGCTGCGG CTGCCGGAGCACGTACACAGGGAGATGGTCGCGGCGGGGGAGCAGAGCGTGCGCCGCGGG AGGAGACTCGGGGAAGGGGTCGGCATGGGCGCTCGGTGCAGCCCCCGGTTTTCGCGGTCG GGCAGATGGTCATCTTTTCTCTCAAATTCTTTGTCAGGAAAGCTGTCTTTCCTCTCCCCG TCGTCGAGGAGAACGCCGGATAGCACCCAGGTGGAAGTGTCATCATCCTCGTCGTCGTCG GTGACGAAGGTGAAAGGGAAGCGCGTGGCCGCCGTCGATGTTGCCGACGACGGTTCTGCT CATGGGACTGCACAGTACCCTGGTTGCACTGTGGCCAGCTCGGCGGCGGCGGCGGCTGTG GACGTGGAGAAGGCAGCTACCAGGCAAGTTCGAACATAGAAAACGAACAGAAGTTTTGAG TGAGAAACTTGAACAGTTGAACTTGACGTCATGCATTTTCCCACATGAAAGAAAGAAATG GTCTTTTTTTGTCGGTGGGACTGTATTCTGTACTCTGTACTAGGTATATTATCAACGCCG ATATGCCCAAATATTATGGGAGCACCTATTGATCAATCAGGTGACTGCAGAATAGCAAAG GCGAAATAATATACATACTAGGTTGAAGAAACTTAGATGCTTTTTTTTTTTTGGAACTAG AAACTTAGTTTGTGTTTGAGGGAGAGGGGATTGAGAAGATTGGGAAGATACGCAAAACGA GATGAGTCATTAGTGCATGATTAATTGAGTATTAACTATTTTAAATTTCAAAAATGGACT AATATGATTTTTTAAAGCAACTTTCATATAGAAATTTTTTGCAAAAAATACACCGTTTAG TAGTTTGGGAAGCGTGCGCGCGGAAAACGAGTGACTTCTCTGATCTCTTTCCAATCTCCT TTGAAAGAACGCACCCTTAGATGTGAATGTATATTATTGTACATGAGCAAGTCAGTAGAA TAAAAGATGCCTGAACAATCGCACGCAGTATCATTTTGTGTCTTTAATTGGATAGATAAT TATATTCATCCTAGCTCTTACACTGTGGTTTGTGCAGGAGACGAATGCATAAATGAAATG TTAGGCATTAACACCCGCCGTTTCGGCCGGGCGCAGGCTCTGTCAATATGACTGGTAAAC CATCTCCATCGACTGGACGCCGAGG
	Intron 1-2	31,116,991	31,120,800			3,810	gtaagaatttaactttacaattcat..........atgctgccattgactcattttgcag
2	ONIVA02G35810.1.exon2	31,120,801	31,121,546	-	-	746	TGCTGGTTTGGTCTCAGAGGCAAGGGATTTGTTTGAGTTCATGAGAACAGAGGGGTCTAC AATTTCATCGCCCACGGCTAAGACATACTCGATTATGATTGCGGCGCTAGCAAAGGCTGG TCAGATGGAGGAGTGCTTTGAACTGATTTCAGAAATGAGAAAGTGCGGCTGTATGCCTGA TGTGTCGACATATAAAGACTTGATTGAAGGCATGTTGTTGGTGGATAAACTGGATGCTGC TTATTGTGTTTTAGATGAGATGGCAAAGGCTGGCTTTCCCCCTGACATTGTCACTTACAA TTGCTTTCTGAAGGTGCTTTGTGGTCTTCAAAAGGCTGATGACGCGCTTGAACTCTGTGA AAGGATGATAGAGGCGCATTGTGAGCCTAGTGTTCATACATATAATATGCTGATGGTGAT GTTCTTTGAGATGAGAGAGCCAGATAGGGCAATCAATATTTGGATCGAGATGGACAAGAG AGGATGCCATCGTGCTGTTGATACCTACGAAACAATGATTGATGGGCTGTTTGATTCTGG AAGAACGGAAGATGCGACCACTCTTCTAGATGAGGTAATAAACCGTGGCATGAAACTTTC GTACAAGAAGTTTGATGCTATCATGTTGCGGCTATCAGCTGTAGGCAACCTTGGCGCGAT ACATCGGTTGTCAGAGCATATGAGGAGATTTTACAATGTTGCAATGTCTAGGCGTTTTGC AATCACACAGAAGAAGAAGAGCATAG
	Intron 2-3	31,121,547	31,125,414			3,868	gtctgagaaggaaatgaatatttcg..........ctgggaaatctgaatgttcgtgcag
3	ONIVA02G35810.1.exon3	31,125,415	31,125,549	-	-	135	AATATATGCGACCGAGCACTTCGGATACCATACACCGTGCGGTACAGACGAAACCACGAA ACCCTCTGAAGTTGAGGCCTCGTGAGCAAATAGGCGACTGCGTCCGGGTGCCGACGAGTT TTCATGAGTTCCGAG
	Intron 3-4	31,125,550	31,126,657			1,108	gtaaaatacggctggtcctagtatc..........atcactgtctctcctatgttgaaag
4	ONIVA02G35810.1.exon4	31,126,658	31,126,683	-	-	26	TACCACGGACACAAGAAGGAAAATGA
	3' downstream sequence						atcaggatttggtgtctctcccatgttgaaagtaccacggacacaagaag..........

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