Transcript: ONIVA01G07960.3

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ONIVA01G07960.1	1362	453aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FHX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA01G07960.2	963	320aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FHX9	-
-	ONIVA01G07960.5	951	316aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FHY2	-
-	ONIVA01G07960.3	924	307aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FHY0	-
-	ONIVA01G07960.4	921	306aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0FHY1	-

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

loadingloaded

▼▲


..........cttcgtctccggcgacgagcggaagcaaaccttctccggcgagcagcagg
ATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGC
CCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTC
GCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTG                   
gtagctctctcctcccctccgttgc..........gcgtctcatcgatccccctgtgtag
GGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGT
CACCAGGAACG                                                 
gtatgctgattctggattgcttcta..........attgaaattttggttctgcttgcag
TGCCTTGCCTAAGACGCGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGG
TAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAG   
gttgacctctcagaatgccttgttt..........ctgttgttctgttggtaatgtatag
CATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAA
CTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGG
AGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTG          
gtaagaaaggctgtgatcctttctt..........ctttgccttcgtcatcttattttag
GCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGT
ACTAGGACATATGACGTTAGCATCAC                                  
gtaagctcttttatttgatctgcat..........gtaacaagtagttctcttatttcag
ATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAG        
gtaagtcattttgcccttagaagtg..........tcatttaattttattgttgttgcag
TCAAGAATGCCACTAAAGCCTGAACTT                                 
gtgtttgaagatatcagccaagatc..........actaaagtggattgtgttgccacag
GTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGC
AAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCGAGGAGTTGAACCA
GAAGTTGACAA                                                 
gtaatattatctacagagatacctt..........caggtaccttttcatatttttgaag
TTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGC
AGCACAAGCAGATGATTTGTTAATTGAAG                               
gtatgcacaatcctcttataatctg..........ggatagcaatttgatgttgcgacag
GAAAGGGAAAGATCCTGTAG                                        
aaggtgtaccaaggcttatcatggtgccccaaataatcattgcttgttgg..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........cttcgtctccggcgacgagcggaagcaaaccttctccggcgagcagcagg
1	ONIVA01G07960.2.exon1	6,000,111	5,999,951	0	2	161	ATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGC CCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTC GCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTG
	Intron 1-2	5,999,950	5,999,869			82	gtagctctctcctcccctccgttgc..........gcgtctcatcgatccccctgtgtag
2	ONIVA01G07960.1.exon3	5,999,868	5,999,798	2	1	71	GGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGT CACCAGGAACG
	Intron 2-3	5,999,797	5,999,554			244	gtatgctgattctggattgcttcta..........attgaaattttggttctgcttgcag
3	ONIVA01G07960.1.exon4	5,999,553	5,999,437	1	1	117	TGCCTTGCCTAAGACGCGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGG TAGTTCTCGGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAG
	Intron 3-4	5,999,436	5,999,348			89	gttgacctctcagaatgccttgttt..........ctgttgttctgttggtaatgtatag
4	ONIVA01G07960.1.exon5	5,999,347	5,999,178	1	0	170	CATCAAAGCAAGAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAA CTGAAGGGATAAAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGG AGGATATACCAGACATGGACACTTATGAAGACTCAGGGAATGATTCAGTG
	Intron 4-5	5,999,177	5,999,078			100	gtaagaaaggctgtgatcctttctt..........ctttgccttcgtcatcttattttag
5	ONIVA01G07960.1.exon6	5,999,077	5,998,992	0	2	86	GCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGT ACTAGGACATATGACGTTAGCATCAC
	Intron 5-6	5,998,991	5,998,534			458	gtaagctcttttatttgatctgcat..........gtaacaagtagttctcttatttcag
6	ONIVA01G07960.1.exon7	5,998,533	5,998,482	2	0	52	ATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAG
	Intron 6-7	5,998,481	5,998,402			80	gtaagtcattttgcccttagaagtg..........tcatttaattttattgttgttgcag
7	ONIVA01G07960.3.exon7	5,998,401	5,998,375	0	0	27	TCAAGAATGCCACTAAAGCCTGAACTT
	Intron 7-8	5,998,374	5,997,853			522	gtgtttgaagatatcagccaagatc..........actaaagtggattgtgttgccacag
8	ONIVA01G07960.1.exon9	5,997,852	5,997,722	0	2	131	GTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGC AAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCGAGGAGTTGAACCA GAAGTTGACAA
	Intron 8-9	5,997,721	5,997,597			125	gtaatattatctacagagatacctt..........caggtaccttttcatatttttgaag
9	ONIVA01G07960.1.exon10	5,997,596	5,997,508	2	1	89	TTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGACTTCGATCTGGGC AGCACAAGCAGATGATTTGTTAATTGAAG
	Intron 9-10	5,997,507	5,997,344			164	gtatgcacaatcctcttataatctg..........ggatagcaatttgatgttgcgacag
10	ONIVA01G07960.1.exon11	5,997,343	5,997,324	1	0	20	GAAAGGGAAAGATCCTGTAG
	3' downstream sequence						aaggtgtaccaaggcttatcatggtgccccaaataatcattgcttgttgg..........

Exons

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Transcript: ONIVA01G07960.3

Exons

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