Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: ONIVA12G05730.1

.

Location

Chromosome 12: 4,931,234-4,947,635 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 27 domains and features.

Gene

This transcript is a product of gene ONIVA12G05730 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	ONIVA12G05730.1	9191	1268aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0J7Y8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	ONIVA12G05730.2	8848	1209aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0J7Y9	-
-	ONIVA12G05730.4	8735	1209aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0J7Y9	-
-	ONIVA12G05730.3	8659	1146aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0J7Z0	-

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	26	78	-	SSF57850	-
PANTHER	29	966	-	PTHR15315	-
CDD	151	182	-	cd15517	-
Superfamily	147	185	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	65	185	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	148	182	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	131	183	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
Pfam	32	72	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	33	71	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	33	72	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
SMART	123	182	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE patterns	49	58	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	21	96	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Gene3D	134	183	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

Show entries

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	690	762
MobiDBLite	699	732
MobiDBLite	744	756
MobiDBLite	995	1021
MobiDBLite	1008	1019
MobiDBLite	1079	1197
MobiDBLite	1082	1099
MobiDBLite	1118	1131
MobiDBLite	1150	1171
MobiDBLite	1175	1190
Seg	641	652
Seg	742	756
Alphafold	1	1268

.

Personal Data