Oryza nivara (Oryza_nivara_v1.0)
Description

Transducin/WD40 repeat-like superfamily protein [Source:Projected from Arabidopsis thaliana (AT4G02730) TAIR;Acc:AT4G02730]

Location
About this transcript

This transcript has 2 exons, is annotated with 37 domains and features and maps to 47 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ONIVA07G17730.11512338aa
 
Protein coding
A0A0E0I2L0 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
CDD18334-cd00200-
PANTHER22334-PTHR22847-
PROSITE profiles6397-PS50294-
PROSITE profiles128166-PS50294-
PROSITE profiles171203-PS50294-
Prints8296G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints190204G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints278292G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
SMART1453WD40 repeatSM00320IPR001680 [Display all genes with this domain]
PROSITE profiles2162WD40 repeatPS50082IPR001680 [Display all genes with this domain]
Pfam2249WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART5695WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam6095WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles6397WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART121161WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam123161WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles128170WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART164203WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam165203WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles171212WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART206246WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam208244WD40 repeatPF00400IPR001680 [Display all genes with this domain]
SMART249291WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam250291WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles274300WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART294335WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam297334WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE patterns8296WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
PROSITE patterns148162WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
PROSITE patterns278292WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
Superfamily12334WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D3338WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
Seg321
Seg5059
Seg106113
Alphafold1338
Alphafold1338