Oryza nivara (Oryza_nivara_v1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 4: 22,398,626-22,399,264 reverse strand.
This transcript has 1 exon, is annotated with 13 domains and features and maps to 48 oligo probes.
This transcript is a product of gene ONIVA04G21890 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| PANTHER | 20 | 166 | - | PTHR45969 | - |
| Superfamily | 111 | 162 | - | SSF57850 | - |
| SMART | 111 | 156 | Zinc finger, RING-CH-type | SM00744 | IPR011016 [Display all genes with this domain] |
| Pfam | 111 | 156 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 112 | 155 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 112 | 156 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 109 | 160 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 11 | 32 |
| Seg | 39 | 48 |
| Seg | 61 | 77 |
| Seg | 188 | 200 |
| Alphafold | 1 | 212 |
| Alphafold | 1 | 212 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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