Oryza nivara (Oryza_nivara_v1.0)
Location
About this transcript

This transcript has 7 exons and is annotated with 41 domains and features.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ONIVA04G17680.32815804aa
 
Protein coding
A0A0E0H3F1 Ensembl Canonical
-ONIVA04G17680.12743780aa
 
Protein coding
A0A0E0H3E9 -
-ONIVA04G17680.42707768aa
 
Protein coding
A0A0E0H3F2 -
-ONIVA04G17680.22704767aa
 
Protein coding
A0A0E0H3F0 -
-ONIVA04G17680.62608735aa
 
Protein coding
A0A0E0H3F4 -
-ONIVA04G17680.52548715aa
 
Protein coding
A0A0E0H3F3 -

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PROSITE profiles316350-PS50294-
PROSITE profiles425458-PS50294-
PROSITE profiles465499-PS50294-
Prints335349G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints443457G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
Prints485499G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
PANTHER575712WD repeat-containing protein WDR44/Dgr2PTHR14221IPR040324 [Display all genes with this domain]
SMART309348WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam316347WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles316357WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART418456WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam420455WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles425465WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART459498WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam461498WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE profiles465499WD40 repeatPS50082IPR001680 [Display all genes with this domain]
SMART500539WD40 repeatSM00320IPR001680 [Display all genes with this domain]
Pfam511539WD40 repeatPF00400IPR001680 [Display all genes with this domain]
PROSITE patterns335349WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
Superfamily314706WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
Gene3D295395WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
Gene3D412659WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite116
MobiDBLite1156
MobiDBLite2534
MobiDBLite4758
MobiDBLite133143
MobiDBLite207217
MobiDBLite207297
MobiDBLite219230
MobiDBLite254271
MobiDBLite273285
MobiDBLite603685
MobiDBLite633658
MobiDBLite666678
Seg514
Seg2539
Seg4758
Seg207217
Seg666678
Alphafold1735