Oryza nivara (Oryza_nivara_v1.0)
Location
About this transcript

This transcript has 19 exons and is annotated with 41 domains and features.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ONIVA02G33690.258581486aa
 
Protein coding
A0A0E0GCF2 Ensembl Canonical
-ONIVA02G33690.157651455aa
 
Protein coding
A0A0E0GCF1 -

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Pfam359480-PF13832-
CDD360480-cd15571-
CDD10901134-cd15489-
Pfam11591265-PF13832-
CDD11601265-cd15571-
PROSITE profiles357481Extended PHD (ePHD) domainPS51805IPR034732 [Display all genes with this domain]
PROSITE profiles11571266Extended PHD (ePHD) domainPS51805IPR034732 [Display all genes with this domain]
PANTHER1651029Histone Modification RegulatorPTHR13793IPR050701 [Display all genes with this domain]
Superfamily292341Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
Superfamily10831135Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
PROSITE profiles291342Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
Pfam307339Zinc finger, PHD-fingerPF13831IPR019787 [Display all genes with this domain]
PROSITE profiles10881137Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
SMART293340Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
SMART425481Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
SMART10901135Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
SMART12121266Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
PROSITE patterns294339Zinc finger, PHD-type, conserved sitePS01359IPR019786 [Display all genes with this domain]
PROSITE patterns10911134Zinc finger, PHD-type, conserved sitePS01359IPR019786 [Display all genes with this domain]
Gene3D284344Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
Gene3D352483Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
Gene3D10771140Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
Gene3D11561268Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite111
MobiDBLite122
MobiDBLite163184
MobiDBLite164184
MobiDBLite664687
MobiDBLite745760
MobiDBLite745792
MobiDBLite763775
MobiDBLite10181049
MobiDBLite14031486
MobiDBLite14211437
MobiDBLite14431453
Seg314
Seg174186
Seg9871001
Seg10021015
Seg13001313
Ncoils12851305