Oryza nivara (Oryza_nivara_v1.0)
Location
About this transcript

This transcript has 14 exons, is annotated with 32 domains and features and maps to 55 oligo probes.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-ONIVA01G31070.137111236aa
 
Protein coding
A0A0E0FRH1 Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Gene3D35185-1.20.120.520-
CDD39165-cd12108-
Gene3D295442-1.20.120.520-
CDD296424-cd12108-
Gene3D643865-1.20.120.520-
CDD648807-cd12108-
PANTHER6811225-PTHR21319-
Superfamily11171164-SSF57850-
CDD11181160-cd16464-
Gene3D11901231-2.20.28.10-
Pfam43167Hemerythrin-likePF01814IPR012312 [Display all genes with this domain]
Pfam646808Hemerythrin-likePF01814IPR012312 [Display all genes with this domain]
Pfam11661223RCHY1, zinc-ribbonPF14599IPR039512 [Display all genes with this domain]
PROSITE profiles9831052Zinc finger, CHY-typePS51266IPR008913 [Display all genes with this domain]
Pfam9901058Zinc finger, CHY-typePF05495IPR008913 [Display all genes with this domain]
Superfamily9821046Zinc finger, CHY-type superfamilySSF161219IPR037274 [Display all genes with this domain]
PROSITE profiles10551118Zinc finger, CTCHY-typePS51270IPR017921 [Display all genes with this domain]
Superfamily10561111Zinc finger, CTCHY-type superfamilySSF161245IPR037275 [Display all genes with this domain]
PROSITE profiles11191160Zinc finger, RING-typePS50089IPR001841 [Display all genes with this domain]
SMART11191160Zinc finger, RING-typeSM00184IPR001841 [Display all genes with this domain]
Gene3D11141162Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite543579
MobiDBLite563577
MobiDBLite877902
MobiDBLite888902
Seg1836
Seg600630
Seg877894
Seg11741186
Alphafold11236
Alphafold11236
Alphafold11236