Oryza meridionalis (Oryza_meridionalis_v1.3) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 4: 20,589,894-20,597,627 forward strand.
This transcript has 4 exons, is annotated with 13 domains and features and maps to 54 oligo probes.
This transcript is a product of gene OMERI04G15210 Show transcript tableHide transcript table
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1 CAAAGAACACTGACTCAGTAAAATGCTGCTGGTGGTATACATATCTCCAATGGAATTCAA 60 ............................................................ ............................................................ 61 AATCCTGCGAGAGCTGAAAGGGGAGGGGGTGGCAAAGGCGAGGAGCGGGAGGTACGGACA 120 ............................................................ ............................................................ 121 TGGTCGTAGACGGGGGCGATGCGGCTGAAGAGGGCCTGCCGCTCGTCGGCCGCGGAGGAC 180 ............................................................ ............................................................ 181 GAGCCGCAGCTCACGGCGGCGAACCCGCGGCGGCGGCGGCGAGCGGCGGGGGCGGGCGCC 240 ............................................................ ............................................................ 241 GCGGGGCCCGCCGAAATCGCGGCGGCTAGGGTGGCCATGGGTGTCCGCCACGTCCCCAGT 300 ............................................................ ............................................................ 301 CAGGATAGGTATATCGTGACCGGTTTGGACTAAGTGTTTGACTATTTTGCCCCCCGCCGC 360 ............................................................ ............................................................ 361 CGCCGCCTCGCCGCGGAAGTGAAAGCGCTCTCGACTCTCGCCGCCGCCGCGAGCCGCGTC 420 ............................................................ ............................................................ 421 GTGCGGGAACGCGAGGGTTTTTCCAGGGGGATGGATTTGGGGTCGTGCTACCTCGGCGGC 480 ..............................ATGGATTTGGGGTCGTGCTACCTCGGCGGC 30 ..............................-M--D--L--G--S--C--Y--L--G--G- 10 481 AACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCCGCCACGTCCTCGCCGCCGCC 540 31 AACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCCGCCACGTCCTCGCCGCCGCC 90 11 -N--A--D--A--V--E--F--C--P--H--R--P--F--R--H--V--L--A--A--A- 30 541 ACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACCGCGCGGGCAGCGTGTCGCTC 600 91 ACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACCGCGCGGGCAGCGTGTCGCTC 150 31 -T--Y--T--L--Q--E--Q--G--G--E--R--Q--D--R--A--G--S--V--S--L- 50 601 TTCGCCGTCGACGCCGGCGAGGAGGACGCGTCCCGGAGGCTCCGGCTGCTCCACACGGTG 660 151 TTCGCCGTCGACGCCGGCGAGGAGGACGCGTCCCGGAGGCTCCGGCTGCTCCACACGGTG 210 51 -F--A--V--D--A--G--E--E--D--A--S--R--R--L--R--L--L--H--T--V- 70 661 GAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGCGCCTCTGCTCGCGCAGGCC 720 211 GAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGCGCCTCTGCTCGCGCAGGCC 270 71 -E--T--A--G--V--F--D--M--K--W--S--P--V--A--P--L--L--A--Q--A- 90 721 GACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGAGGACGGATCGGACAAAGGT 780 271 GACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGAGGACGGATCGGACAAAGGT 330 91 -D--A--H--G--R--L--A--L--W--R--L--E--Q--E--D--G--S--D--K--G- 110 781 GCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGGAC 840 331 GCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGGAC 390 111 -A--V--L--R--D--V--C--S--G--D--I--S--S--S--M--C--L--F--V--D- 130 841 TGGAACCAAACTGCCGAGGCACTTTCTGTTGGATTATCGGATGGTTCCCTGTCTGTGGTT 900 391 TGGAACCAAACTGCCGAGGCACTTTCTGTTGGATTATCGGATGGTTCCCTGTCTGTGGTT 450 131 -W--N--Q--T--A--E--A--L--S--V--G--L--S--D--G--S--L--S--V--V- 150 901 TCCATGAGGGAGGACCGCTTGGAGGTGTCAGAACAGTGGACTGCTCATCAGTATGAAGTG 960 451 TCCATGAGGGAGGACCGCTTGGAGGTGTCAGAACAGTGGACTGCTCATCAGTATGAAGTG 510 151 -S--M--R--E--D--R--L--E--V--S--E--Q--W--T--A--H--Q--Y--E--V- 170 961 TGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACTGC 1020 511 TGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACTGC 570 171 -W--T--C--Y--F--D--R--A--N--P--H--L--L--Y--S--G--S--D--D--C- 190 1021 TCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAACGCTGTGTTTCAGAACAAAAAG 1080 571 TCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAACGCTGTGTTTCAGAACAAAAAG 630 191 -S--F--S--C--W--D--L--R--Q--N--P--S--N--A--V--F--Q--N--K--K- 210 1081 TCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATTCTACTT 1140 631 TCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATTCTACTT 690 211 -S--H--N--M--G--V--C--C--I--A--Q--N--P--L--E--G--N--I--L--L- 230 1141 ACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCGTT 1200 691 ACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCGTT 750 231 -T--G--S--Y--D--E--F--L--R--V--W--D--I--R--S--M--V--K--P--V- 250 1201 AATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTATT 1260 751 AATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTATT 810 251 -N--V--K--S--L--N--L--G--G--G--V--W--R--I--K--Y--H--P--L--I- 270 1261 GCAGATGTCGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTACC 1320 811 GCAGATGTCGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTACC 870 271 -A--D--V--V--L--A--A--C--M--H--N--G--F--A--I--V--K--V--G--T- 290 1321 GGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGTGGAT 1380 871 GGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGTGGAT 930 291 -G--D--A--A--V--V--E--T--Y--C--K--H--E--S--L--A--Y--G--V--D- 310 1381 TGGCAGAGAAGTGAAGGTGCAGAACAGAACAAGAATTGTTCAGTTGTTGCTACCTGTTCA 1440 931 TGGCAGAGAAGTGAAGGTGCAGAACAGAACAAGAATTGTTCAGTTGTTGCTACCTGTTCA 990 311 -W--Q--R--S--E--G--A--E--Q--N--K--N--C--S--V--V--A--T--C--S- 330 1441 TTTTATGATCGACTCCTCTGTCGACTAAATCCCACTTCGGTGAAGCGGTGGAACCCCACA 1500 991 TTTTATGATCGACTCCTCTGTCGACTAAATCCCACTTCGGTGAAGCGGTGGAACCCCACA 1050 331 -F--Y--D--R--L--L--C--R--L--N--P--T--S--V--K--R--W--N--P--T- 350 1501 ACCGATTCTGGGTTCTTTGCAATAGATTTCTCTGGAGAAGTACCTGCAGACATCAGCAAC 1560 1051 ACCGATTCTGGGTTCTTTGCAATAGATTTCTCTGGAGAAGTACCTGCAGACATCAGCAAC 1110 351 -T--D--S--G--F--F--A--I--D--F--S--G--E--V--P--A--D--I--S--N- 370 1561 CTCGTCAAGGTATAAAGTAGCTTTCCCCCTCGTCTTGTTTGTACTCACTACTAACCATGG 1620 1111 CTCGTCAAGGTATAA............................................. 1125 371 -L--V--K--V--*-............................................. 374 1621 AAGATGAATGGCTTGAACATGCGCATGGTTCTTGAGAGCAGCAGGAGGAGGAGGATGAAG 1680 ............................................................ ............................................................ 1681 AGCAATGGCTAAGCTCCAGTTCAAGAAGCTCTTCAACTCCATGGTGCCTTTCCGGCCTCC 1740 ............................................................ ............................................................ 1741 TAGGTGGTCGGCTGAGGTACGCACCAAACCGGCAAGTCACAAAACGGCAATGGTGAAACT 1800 ............................................................ ............................................................ 1801 CCAGCAGGAGTCCACCCTTCTCTTTTCTGCATTTCCACCCTTCCAGTTGTATCAGGTGGT 1860 ............................................................ ............................................................ 1861 GGCGAAATAATCAGAAATATCTGTGTGATCCTTAATATCAGGTGGTGGCAAAATTATTGA 1920 ............................................................ ............................................................ 1921 TACTTAATTGCTGAGTCAATGCTTGTTTTATGTGTACTCTGGAAATTGCCCTACTACTAA 1980 ............................................................ ............................................................ 1981 TAAATGGCTGCTTTTTATCTAGAAAGATGCTATGTTGTCTCATTTGATTGTCTTTGTGCC 2040 ............................................................ ............................................................ 2041 AGTTAGCAGTTGGTCATATCCTTGCTTTGAGACAAAGTTGCTTCTGCTGGGGGGATGGAG 2100 ............................................................ ............................................................ 2101 AGTACACCTCATTTCATTTCTGCCTTATGCCATTGCAAGTATGTTGATCCTGTAAAGATC 2160 ............................................................ ............................................................ 2161 TACCATAAGAAATCGATTTGCATGTTATGTTGGTGACTATCCAGTTTTTTCTATTGATAT 2220 ............................................................ ............................................................ 2221 ACGTTTCCATCGAGGCAGAAATTTCCAGGTAAAAAACTATGATTTGAAATATGCCAATAA 2280 ............................................................ ............................................................ 2281 GATTTTTAAAACTGAAAAGAGGAGGAAAAAATTCAAAGAAGTTTTCCCTTTTGCTGCTGC 2340 ............................................................ ............................................................ 2341 CTGCTGGCTGAGTCCAGCATTTCTTCTGAACAAGCCCGGAATGATTTACTGAAGGAAGAT 2400 ............................................................ ............................................................ 2401 GAATTGTTGCAACGCAAAAGAGTACTACTACTTTGCAGTGGTGCCTGAAGCAGAACTAAC 2460 ............................................................ ............................................................ 2461 TTACAGTTACATGTGTTTCACTGGCTCCTGAGTCCTTGAACATGAAACCTTAAGACTCAG 2520 ............................................................ ............................................................ 2521 ACGTGGAAACTTCTTGCAGTGTATTCTATGAAAAGGCAGCTATGGTTTCGATATGAATAT 2580 ............................................................ ............................................................ 2581 GTGATGATATTCTTCAGATGGTACATCAGTTATTAAGCTCTCATATGTACATGAACTATC 2640 ............................................................ ............................................................ 2641 GGGAGGAAAGAATTAAAACCTCACCATCTTATTAACGATTAATCTGCTTCTACCTGATCT 2700 ............................................................ ............................................................ 2701 ACACTGCAGGATTTTCCTGTGTTTATGTGCACCTCTAACATGAACCATGTTACCACTCAT 2760 ............................................................ ............................................................ 2761 CATTTTTTTTCGCCTGTGCCTTGTGTGTCGAGACTTTGAGAAATCAACTTCTCATAGTCT 2820 ............................................................ ............................................................ 2821 CCAGGATCCTCTCCCTGCCTGGAGCAGCGAGGCGTACAGCAGCTCGTTCCAGGAATCCGG 2880 ............................................................ ............................................................ 2881 CACGCCGGGCAGGCACCAGTGGCTGCAGTCCTGC 2914 .................................. ..................................
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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