[["rect",[150,5,235,10],{"title":"Exon: OMERI06G25690.1.exon1; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 1 ; Last aa: 104 ; Start phase: 0; End phase: 2; Length: 312bp, 104 aa"}],["rect",[234,5,266,10],{"title":"Exon: OMERI06G25690.1.exon2; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 105 ; Last aa: 143 (2nd base); Start phase: 0; End phase: 1; Length: 116bp, 38 2/3 aa"}],["rect",[264,5,299,10],{"title":"Exon: OMERI06G25690.1.exon3; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 143 (3rd base); Last aa: 182 ; Start phase: 2; End phase: 2; Length: 118bp, 39 1/3 aa"}],["rect",[297,5,426,10],{"title":"Exon: OMERI06G25690.1.exon4; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 183 ; Last aa: 339 ; Start phase: 0; End phase: 2; Length: 471bp, 157 aa"}],["rect",[424,5,462,10],{"title":"Exon: OMERI06G25690.1.exon5; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 340 ; Last aa: 384 ; Start phase: 0; End phase: 2; Length: 135bp, 45 aa"}],["rect",[460,5,488,10],{"title":"Exon: OMERI06G25690.8.exon6; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 385 ; Last aa: 417 (1st base); Start phase: 0; End phase: 0; Length: 97bp, 32 1/3 aa"}],["rect",[486,5,512,10],{"title":"Exon: OMERI06G25690.1.exon7; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 417 (2nd base); Last aa: 446 ; Start phase: 1; End phase: 2; Length: 89bp, 29 2/3 aa"}],["rect",[510,5,526,10],{"title":"Exon: OMERI06G25690.1.exon8; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 447 ; Last aa: 463 ; Start phase: 0; End phase: 2; Length: 51bp, 17 aa"}],["rect",[524,5,581,10],{"title":"Exon: OMERI06G25690.1.exon9; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 464 ; Last aa: 531 ; Start phase: 0; End phase: 2; Length: 204bp, 68 aa"}],["rect",[579,5,613,10],{"title":"Exon: OMERI06G25690.1.exon10; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 532 ; Last aa: 571 ; Start phase: 0; End phase: 2; Length: 120bp, 40 aa"}],["rect",[612,5,639,10],{"title":"Exon: OMERI06G25690.1.exon11; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 572 ; Last aa: 602 ; Start phase: 0; End phase: 2; Length: 93bp, 31 aa"}],["rect",[637,5,655,10],{"title":"Exon: OMERI06G25690.1.exon12; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 603 ; Last aa: 622 ; Start phase: 0; End phase: 2; Length: 60bp, 20 aa"}],["rect",[653,5,678,10],{"title":"Exon: OMERI06G25690.1.exon13; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 623 ; Last aa: 651 ; Start phase: 0; End phase: 2; Length: 87bp, 29 aa"}],["rect",[676,5,701,10],{"title":"Exon: OMERI06G25690.1.exon14; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 652 ; Last aa: 679 ; Start phase: 0; End phase: 2; Length: 84bp, 28 aa"}],["rect",[699,5,720,10],{"title":"Exon: OMERI06G25690.1.exon15; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 680 ; Last aa: 704 (1st base); Start phase: 0; End phase: 0; Length: 73bp, 24 1/3 aa"}],["rect",[718,5,739,10],{"title":"Exon: OMERI06G25690.1.exon16; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 704 (2nd base); Last aa: 727 (1st base); Start phase: 1; End phase: 0; Length: 69bp, 23 aa"}],["rect",[737,5,840,10],{"title":"Exon: OMERI06G25690.1.exon18; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 727 (2nd base); Last aa: 851 ; Start phase: 1; End phase: 2; Length: 374bp, 124 2/3 aa"}],["rect",[838,5,969,10],{"title":"Exon: OMERI06G25690.8.exon18; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 852 ; Last aa: 1011 (2nd base); Start phase: 0; End phase: 1; Length: 479bp, 159 2/3 aa"}],["rect",[967,5,986,10],{"title":"Exon: OMERI06G25690.5.exon20; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 1011 (3rd base); Last aa: 1031 ; Start phase: 2; End phase: 2; Length: 61bp, 20 1/3 aa"}],["rect",[984,5,997,10],{"title":"Exon: OMERI06G25690.5.exon21; Location: <a href=\"/Oryza_meridionalis/Location/View?db=core;g=OMERI06G25690;r=6:29482712-29493503;t=OMERI06G25690.8\">6:29482712-29493503</a>; First aa: 1032 ; Last aa: 1045 ; Start phase: 0; End phase: 2; Length: 42bp, 14 aa"}],["rect",[15,5,106,19],{"klass":["label","oPyZ2AvN"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[150,20,189,25],{"title":"MobiDB lite; Position: 1-48"}],["rect",[175,20,188,25],{"title":"MobiDB lite; Position: 32-46"}],["rect",[320,20,333,25],{"title":"MobiDB lite; Position: 211-226"}],["rect",[320,20,365,25],{"title":"MobiDB lite; Position: 211-265"}],["rect",[333,20,365,25],{"title":"MobiDB lite; Position: 227-265"}],["rect",[739,20,766,25],{"title":"MobiDB lite; Position: 728-761"}],["rect",[749,20,762,25],{"title":"MobiDB lite; Position: 741-756"}],["rect",[15,20,82,34],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","WMSphMAE"]}],["rect",[151,36,167,41],{"title":"Low complexity (Seg); Position: 2-21"}],["rect",[282,36,302,41],{"title":"Low complexity (Seg); Position: 164-187"}],["rect",[391,36,401,41],{"title":"Low complexity (Seg); Position: 298-310"}],["rect",[15,36,136,50],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","WzLEeNKj"]}],["rect",[150,52,995,57],{"title":"AFDB-ENSP mappings; Position: 1-1044"}],["rect",[15,52,124,66],{"klass":["label","mL9I7hK5"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[194,68,333,82],{"title":"Superfamily SSF52113; Positions: 55-168; Interpro: IPR036420; BRCT domain superfamily","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166692;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_superfamily;translation_id=27963"}],["rect",[638,68,987,82],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166695;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_superfamily;translation_id=27963","title":"Superfamily SSF100879; Positions: 603-716; Interpro: IPR036775; DNA polymerase, Y-family, little finger domain superfamily"}],["rect",[446,68,635,82],{"title":"Superfamily SSF56672; Positions: 366-598; Interpro: IPR043502; DNA/RNA polymerase superfamily","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166688;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_superfamily;translation_id=27963"}],["rect",[15,68,82,82],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","KE60yOyW"]}],["rect",[218,110,285,124],{"title":"SMART SM00292; Positions: 85-164; Interpro: IPR001357; BRCT domain","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16666684;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_smart;translation_id=27963"}],["rect",[15,110,46,124],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","wDkjfCLI"]}],["rect",[459,132,569,146],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888968;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfam;translation_id=27963","title":"Pfam PF00817; Positions: 382-517; Interpro: IPR001126; UmuC domain"}],["rect",[588,132,925,146],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888972;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfam;translation_id=27963","title":"Pfam PF21999; Positions: 542-594; Interpro: IPR053848; DNA polymerase IV/DNA polymerase iota-like, thumb domain"}],["rect",[639,151,916,165],{"title":"Pfam PF11799; Positions: 605-721; Interpro: IPR017961; DNA polymerase, Y-family, little finger domain","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888970;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfam;translation_id=27963"}],["rect",[219,132,286,146],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888975;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfam;translation_id=27963","title":"Pfam PF00533; Positions: 86-161; Interpro: IPR001357; BRCT domain"}],["rect",[15,132,40,146],{"klass":["label","Sd6a6mOB"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[217,174,286,188],{"title":"PROSITE profiles PS50172; Positions: 83-167; Interpro: IPR001357; BRCT domain","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888980;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfscan;translation_id=27963"}],["rect",[461,174,594,188],{"title":"PROSITE profiles PS50173; Positions: 385-548; Interpro: IPR001126; UmuC domain","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888977;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pfscan;translation_id=27963"}],["rect",[15,174,112,188],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","66SYwAoj"]}],["rect",[168,216,902,230],{"title":"PIRSF PIRSF036573; Positions: 23-929; Interpro: IPR012112; DNA repair protein Rev1","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166668;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_pirsf;translation_id=27963"}],["rect",[15,216,46,230],{"klass":["label","iES58Plv"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[179,238,995,252],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16888982;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_hmmpanther;translation_id=27963","title":"PANTHER PTHR45990; Positions: 37-1043"}],["rect",[15,238,58,252],{"klass":["label","FLDf4BQy"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[212,260,351,274],{"title":"Gene3D 3.40.50.10190; Positions: 77-171; Interpro: IPR036420; BRCT domain superfamily","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166673;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_gene3d;translation_id=27963"}],["rect",[638,260,987,274],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166661;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_gene3d;translation_id=27963","title":"Gene3D 3.30.1490.100; Positions: 603-726; Interpro: IPR036775; DNA polymerase, Y-family, little finger domain superfamily"}],["rect",[588,279,655,293],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166667;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_gene3d;translation_id=27963","title":"Gene3D 1.10.150.20; Positions: 542-593"}],["rect",[421,298,710,312],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166676;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_gene3d;translation_id=27963","title":"Gene3D 3.30.70.270; Positions: 336-541; Interpro: IPR043128; Reverse transcriptase/Diguanylate cyclase domain"}],["rect",[470,260,543,274],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16166671;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_gene3d;translation_id=27963","title":"Gene3D 3.40.1170.60; Positions: 396-437"}],["rect",[15,260,52,274],{"alt":"Oryza meridionalis (Oryza meridionalis)","klass":["label","zLGBDPM5"]}],["rect",[220,313,288,327],{"title":"CDD cd17719; Positions: 87-170","href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16535242;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_cdd;translation_id=27963"}],["rect",[423,313,732,327],{"href":"/Oryza_meridionalis/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=OMERI06G25690;pf_id=16535243;r=6:29482712-29493503;t=OMERI06G25690.8;track=domain_cdd;translation_id=27963","title":"CDD cd01701; Positions: 338-718"}],["rect",[15,313,34,327],{"klass":["label","K0SNlvwx"],"alt":"Oryza meridionalis (Oryza meridionalis)"}],["rect",[15,355,70,369],{"klass":["label","mfZKqOma"],"alt":"Oryza meridionalis (Oryza meridionalis)"}]]
Protein fingerprints (groups of conserved motifs) from the PRINTS database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the TIGRFAM database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
Protein domains and motifs from the PROSITE patterns database.
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track
URL to turn this track on
Copy the above url to force this track to be turned on
Click on the star to add/remove this track from your favourites
Click on the cross to turn the track off
Click to highlight/unhighlight this track