5' upstream sequence
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]},"expect":[],"seq":[{"style":[1]}],"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"}}}}}
..........tagaagaagttaataataccataatccatttctctatcagcatcagaacc
1 OMERI09G05090.8.exon1 8,101,939 8,101,977 0 0 39
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"expect":[],"seq":[{"style":[1,-38,0]}],"legend":{"_messages":[],"exons/Introns":{"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"exon1":{"class":"e1","default":null,"label":"#1044ee","text":"Translated sequence"}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
ATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCAT
Intron 1-2 8,101,978 8,103,003 1,026
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"seq":[{"style":[1]}],"expect":[],"legend":{"_messages":[],"exons/Introns":{"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null}}},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"flourishes":{}}}
gtgaccagagagaatttggtcgtgc..........aaatccattctcttccggcgagcag
2 OMERI09G05090.8.exon2 8,103,004 8,103,156 0 0 153
{"provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"flanking":{"label":"#008000","text":"Flanking sequence","default":null,"class":"ef"},"exon1":{"default":null,"label":"#1044ee","text":"Translated sequence","class":"e1"}}},"seq":[{"style":[1]},-1,{"style":[1,-32,0]}],"expect":[]},"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only"}
CCGGCAACTCCGGTCGCCGACAAGATGAGCGGCCGCCGGCCGGACGGGAGCTATGGGCCG GAGTACGGCCCCCAGCCTCCTGAGCATGAGTATGGCTTGTACCATCACTGGCCATCCAGA GGGAGGGCACCTTGGCCTCTCTACCATGGCAGG
Intron 2-3 8,103,157 8,103,322 166
{"provisional":{"expect":[],"seq":[{"style":[1]}],"legend":{"_messages":[],"exons/Introns":{"intron":{"class":"ei","default":null,"label":"#aaaaaa","text":"Intron sequence"},"flanking":{"class":"ef","text":"Flanking sequence","label":"#008000","default":null},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only"}
gtagcaactgctatcaaattctcag..........gttttttgtttgaaatttgatccag
3 OMERI09G05090.8.exon3 8,103,323 8,103,384 0 2 62
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"flanking":{"class":"ef","label":"#008000","text":"Flanking sequence","default":null},"exon1":{"class":"e1","label":"#1044ee","text":"Translated sequence","default":null}}},"expect":[],"seq":[{"style":[1]},{"style":[1,-1,0]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GATTATCCTTGGAGATCACTGGAGCAAAGGGTGAGAAGAGAACCTTTTGTGTTTTCCTCC AG
Intron 3-4 8,103,385 8,103,553 169
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]},"expect":[],"seq":[{"style":[1]}],"legend":{"_messages":[],"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"class":"ef","default":null,"label":"#008000","text":"Flanking sequence"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"}}}}}
gtacaggatcacaagactcatgttc..........cattgcaaacatatgtgccattcag
4 OMERI09G05090.8.exon4 8,103,554 8,104,013 2 0 460
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{},"legend":{"_messages":[],"exons/Introns":{"intron":{"class":"ei","label":"#aaaaaa","text":"Intron sequence","default":null},"flanking":{"default":null,"text":"Flanking sequence","label":"#008000","class":"ef"},"exon1":{"default":null,"text":"Translated sequence","label":"#1044ee","class":"e1"}}},"seq":[{"style":[1]},-6,{"style":[1,-39,0]}],"expect":[]}}
AATCCGCCATATCAACGGTGGCGGTAACCCGAGGCCGAGACAAGAGGACCCCGGACTCAC CGATGCCGAGTTCAAGAAGGCGATGGAGCAGCTCAACAAGCAGGCATATAGGTCCTTAGA CCCTCATAAGATGGCTGAATCAAACAGAGGAGGCAGAAACCATGCAAAGAGTGCAAGATC CAAGCCAGCTCCAAACAACACGGAAGAGGAGAAAGCATGTACCATATGTTTGGAGACATT CCTGGCTGGGGAGCAGGTGGTGGCCACACCCTGCAACCACATATTTCACCAAGAGTGTAT CACCCCCTGGGTGAAGGGGCATGGCAACTGCCCGGTGTGCCGGTTCGCGCTATGCGAGAG GAACACCGTCTCCGACAACAGCCAGAGTGGCGTTGGAGAGGTTGAGGTAGATCTGGACCT GCTGGAGATGATGAGGGCCATGGAGGAGATCTTCAGCCGG
Intron 4-5 8,104,014 8,104,406 393
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"exon1":{"class":"e1","default":null,"text":"Translated sequence","label":"#1044ee"}}},"expect":[],"seq":[{"style":[1]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}},"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only"}
gtcacattctcaaacttcatgccat..........actcatataaaagatttctaagcag
5 OMERI09G05090.8.exon5 8,104,407 8,104,517 0 0 111
{"provisional":{"legend":{"_messages":[],"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"class":"ef","default":null,"text":"Flanking sequence","label":"#008000"},"exon1":{"text":"Translated sequence","label":"#1044ee","default":null,"class":"e1"}}},"seq":[{"style":[1]},{"style":[1,-50,0]}],"expect":[],"ref":{"style":[[0,""],[0,"color:#1044ee"]]},"flourishes":{}},"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only"}
ACCATGTTTAAGGTAGCACCAGCAGCAGGGCATATTGTAAAGACTTTATCTAAGGTGGAG GACAACGGCCAAGATGGAAGAGAACTGTGTCCTAACAAGAAGAGACAAAAT
Intron 5-6 8,104,518 8,104,624 107
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"intron":{"default":null,"text":"Intron sequence","label":"#aaaaaa","class":"ei"},"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"exon1":{"label":"#1044ee","text":"Translated sequence","default":null,"class":"e1"}}},"expect":[],"seq":[{"style":[1]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#aaaaaa"]]}}}
gtaagctgacagttacccagaacat..........catttacagttgtttacatcagtag
6 OMERI09G05090.8.exon6 8,104,625 8,104,702 0 0 78
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"expect":[],"seq":[{"style":[1]},{"style":[1,-17,0]}],"legend":{"_messages":[],"exons/Introns":{"intron":{"label":"#aaaaaa","text":"Intron sequence","default":null,"class":"ei"},"flanking":{"default":null,"label":"#008000","text":"Flanking sequence","class":"ef"},"exon1":{"default":null,"label":"#1044ee","text":"Translated sequence","class":"e1"}}},"flourishes":{},"ref":{"style":[[0,""],[0,"color:#1044ee"]]}}}
GTCTGCTCTTCAGCTGTCTTGAATCAGGTTGGTTGGTTCACTCAAGACATACTTGGGCAG TTCATACTTCGCACCTGA
3' downstream sequence
{"url":"/Oryza_meridionalis/Component/Transcript/Exons/exons?g=OMERI09G05090;r=90X0P+08101939-8104702;t=OMERI09G05090.8;db=core;time=1755307991171.171;adorn=only","provisional":{"legend":{"_messages":[],"exons/Introns":{"intron":{"default":null,"label":"#aaaaaa","text":"Intron sequence","class":"ei"},"flanking":{"class":"ef","default":null,"label":"#008000","text":"Flanking sequence"},"exon1":{"class":"e1","text":"Translated sequence","label":"#1044ee","default":null}}},"expect":[],"seq":[{"style":[1]}],"flourishes":{},"ref":{"style":[[0,""],[0,"color:#008000"]]}}}
aatattaataacaatattagacaatatgaggtatgctaaggaataaaaaa..........
Oryza meridionalis (Oryza_meridionalis_v1.3) ▼ 
Summary
Sequence![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
