Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI06G20000.1

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Location

Chromosome 6: 23,318,190-23,322,087 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features and maps to 38 oligo probes.

Gene

This transcript is a product of gene OMERI06G20000 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI06G20000.1	2135	386aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E3A9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI06G20000.2	1882	386aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E3A9	-

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gtgcaattagtatattaaaaaatctatatttaatgctctatatatgtgtc
1	OMERI06G20000.1.exon1	23,322,087	23,321,651	-	-	437	CAAAGATTCGATGTGATGTTTTTAGAAAAAACTTTTTGGAACTAAACAGGCCCTTATCTA TTGGCCCAAGCCCGGCCCGTGAGCCCCCGAACCCATTCATCATCCCACAAGCGTGAGCGT AGGCGGAATAGCATCCTAGGGCGCACGCGTCACGCCCCGTCCCTCCTCCCCCATCTCTCC TCCCTCGAGGAACTCAATCACGCACAAAAATTACCAGATTACCCCCAACCCCATCATCTC CGATCTCTCTCTCCTCCACCGCGGCGTCTCTCTCTCTCTCCTCCCCCAACCCCAACCACC ACTTCCTCCATCACCAAAGCGCCGCTCCCTCGCCGTCGCCGCCACCTCCGCCGCCGCCGC CGCCGGCGGTCGTCGAGGCGGGAGGACTCCCCCCCGCGCGCCGCGCTCGATCCGTCCGCT CCCCCAGTACGCCCGAG
	Intron 1-2	23,321,650	23,320,270			1,381	gtgaggcccgtccccttcgattggt..........tttcctcccattcttttgatttcag
2	OMERI06G20000.1.exon2	23,320,269	23,320,245	-	-	25	TGTCAGGAGGATATGACTATGTTAG
	Intron 2-3	23,320,244	23,319,863			382	gtcattttggcgtgttctaatgttg..........tctgtggttttttgacttggtacag
3	OMERI06G20000.1.exon3	23,319,862	23,318,190	-	-	1,673	GGCAGTGATACTCTGCTGCTTAGTTGGGTGCAGTGTGCACTACAAGTCTACAACAATGGA GCTTGACAGTCTAAGAGAGGCGTTTGACCGAGTTATTGAAAAACGTGCTTCCTCTTCTGC TAAAGCTCAGGAAGTTATTGATCAGATAGTGAGTGAAGTTGAGCAGGCAATCACGAAGAT GCAGATGATGAATACAGATTCCATGGGTAGTGCTGACCATTCATCCGTCCTGGCAGAATT GAAAGCCAAGTTGAATGAATTGGCGCCACTAAATCAACTAGAAGGTTGTCAAAAGGAATT GAATGTTGCACTTAGCAAATATCTCAAGCTGCTCGAGAAGTCTTTCAGTCCAGACATATC GAAAGCATATCGAAATGTGGATTTTGAGGCCAGTACTATAAACAGCATAATAGCAAATCA TTTCTACCGCCAGGGCGTTTTTGATCTTGGAGACTCATTTGTCCGTGAGTGTGGTGAATC AGATGGGGCACACTTGAAACTACAATTCCAAGAGATGTATTCAATTCTTGAAGCAATGCA AGTTAGAAACCTCCAACCTGCTCTCAGTTGGGCTGCCAAGAACCATGATCAGCTTTTGCA GAATGGTTCAATGCTTGAGTTGAAACTTCATCAGCTTCAGTTTGTTGAGATACTAACAAA AGGAAGTAGAGATGAGGCTTTAAAGTATGCAAGAACTCACTTAGTGCCCTTTGCATCCTT GCACAAGGCAGAGATCCAAAAGCTAATGGCCTGCCTTCTCTGGGCTGATAGGCTTGATCA GTCCCCTTATGCCGAATTCATGTCATCGACTCATTGGGAGAAGCTAGCGGAGGAGCTTAC CCATCAATTCTGCAGTCTTTTGGGGCAATCTAGTGAGAGCCCACTTGGTGTGGCAGTATC AGCTGGCTTTCAAGGACTTCCAACCTTGCTGAAGCTAACGACAGTGATGGCTGCCAAAAA ACAGGAGTGGCAGGCGATGAAACAATTGCCAGTACCCATAGATATCGGACCAGAATTCCA GTACCACTCTGTCTTTGTATGTCCGGTGCTCAGAGAGCAGTCAAGTGATGAAAACCCTCC AATGCTGATGCCCTGTGGACACGTTGTGTCGAAACAGTCGATAATGAAGCTATCAAAGAG CAGCTCCAGACCCTTCAAATGCCCATACTGTCCCTCAGAGGCTGTTGCTTCTCAGTGCAA GCAGCTCCATTTCTGAATGTTCTTTCCCTGCTCAGATATGTTTATACACGTATTAATTTA TGTTCCTGTGGCACCCATCCAATAACTACCTTGTAATATAATCCTGTATGTTAATGAAGA TTCTAGTGCTGTCTCTGGATGTTAATGTGTACAGTTGCAAATTCCTGTTCGTTTTATCAA ATTATCTCTGGGATGACTGAACAGAAAATAAGTGCTACTAGTCACTCTGGCAGTCTTAGG GCTTATGATTGTCTATTGGTTTTACAGCCATGTAGATCGGTCAAATCATGTGTAAAATTG GCAGTGAGCCTTTCTGGTTAAGTTTCCTGCTAAACATGGTAATGAACATTTATCTGGCCA ATTGATACCGAATAGATTGCTGCTATTAGCTTATCTTTTTATAAGCATTTTGTGTTGTTA GTAACTTAGCATGTCTTTTGTTAGCAATTAGGGCTCGATCCATATCCTTGTCT
	3' downstream sequence						gctaatactttgtaaattcattagaaaaataaaatactacttctgtttta..........

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