Transcript: OMERI03G00350.3

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI03G00350.2	2529	555aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CTS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI03G00350.3	2125	502aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CTT0	-
-	OMERI03G00350.1	1611	536aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0CTS8	-

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

▼▲


..........tgctttgcccgctctctctcctcctccgccgccattgccaccgatttgcc
ATGGCGTCGCGCTCCCGTGGAAGGCGCCTTCCTCCTCCTCATCCGCCGCTCATCCAGGAG
TTCCTCGACGACGACCTCTTCGATGTAGAGGTCAACTACAGCGACGAGGAAGAAGAGGAG
GAGGAAAGCGATGAAGAGGAGTCGGAGTCGGAGGACAACGAACCGGAGGAGGGGGTGCCG
GGGCAGGAGAGTATCGGGGAGGGATGCGGGCCGGCCATACAAGCTAGG            
gtttccagcgccgccgcggagaaga..........atcgtctcttgctactgatttttag
TGCCCTCAGTGTGGGAAAAGGTTCAGACCTAAGGACATTACCAATCTCTATGCACCAGAG
GTCGCAGTTCCAAATAATGATCTGGAAAAG                              
gttcgagtttattttgttgccagtt..........aaccggaccctgtttcattcttcag
GAAGTATTGTATCTAAGGGGGAAAGCTGAATCCCTTGGGGAAACG               
gtacaatttctttgggtcacctcac..........atttttatttttttattgaggatag
GTGATGAAACATGAGAAATTGATAGAGGAGATGAATGAGAGATTGGTTGAGTTGACAAGT
GCTCAGAAG                                                   
gtatgctgtcacctattagtaccat..........tttacttgttatgtgtgccttgcag
AGGCAGATTCTGTCAGAGCAGAGATTAATGAACGTTGGTAGCTCAAAGAGACAG      
gtaatgccatctaattttaaatttc..........ttcaattgataaccatgttttgtag
AAAGAATTCTTCATGGATGGACTTCGAGTCATGGCCATAGATGCACTTAACCAAACAATT
CTTGCTTCTGGAAAAGCACCAGGCATAGGACAGGAACATGTTCTTTATAAG         
gtacattttttaaatcggtagcttt..........acctttttgcaattcttgtctacag
TTTAGCATGGTTTCCCATCACGAAGCTCGGAATATACAACTTCCTCTGGATACTAAAACT
GTCAGGGACATATGTATCTTACCTAGTGGCTCTGCTATTTTTACATCACTGGGCAGGAAA
CTATCATCATTTAG                                              
gtttgtcttcaatttagtagcctgt..........acactgcacaatattcttaatccag
CATGACGGCTGACCGTGTCGTTCTTCAGTGTGATTTGCCG                    
gtaattatttaaccctgctatcctt..........ctttctctattacaataccatgcag
TATCCTGGCTGGTCATGTTGTGCGGATGAATCTTCGCGTCAGATTTGTGCTGGATTGCAG
gttaatcttttagtatctcctgatc..........tgaaccgctttcttatgtactgcag
AATGGCAATCTTATCATCTTTGATATCCGTCAAACCTCAAGACCGTTGCATTCTATGGTG
GGTTTATCTACAACACCGGTTCATACTCTCCATACGGTCATTGATAACAACGGTTCTAGA
AAGTTTCTCTCTGCCTCTTCTATAGGCCCCTGCATGTGGGATACTGATGGTAATCAAGGC
AG                                                          
gtacgcaaaaaagtactaacagttt..........tgtttgcctttgggctcggttgcag
GCCAAAGTTGCTATTGGGGACAGATAATCAACGGGTGTGCATTTCTCTTGCATGTGCCCC
TTCATCAAGTGATCTTTTGGTAGCTTCCTTTCGGCCAAAGGTTGAAACGTCCGAGGATGC
TACAGCATCTCAAGTGTATCTATCACAAACACCAACACCCTCTGGTGGAGGCAAATTAGG
GTATCATTCCCTCATCAGGAGGGCGGGGAACTCTTCATCCTTCACCGAAGATAGGACATG
CAGCACACTTGTGAGCGAAATTCGCATGTCGAAATCCGCAATCATACCTTATGGAAACAA
CCAACATCTGTTTGCCTACGGAGATGAGTCGCTGCGTGGGGTCCGGACCTGGCGACTACC
TTCGTTTGAGATGCATTCTGATCTCAGCTCCCTCCAGCAACCGGTCCTGGATCTAAGGTA
TGCAGAAAGTTCATCAGGAGGGAGGTATCTCGGGTACCTGAGCACGGAAAAGTTGCAGGC
TTTCAGAATTAGGTAGCATGTCAGGAGGGAAACTTAATTTTAGGCTAGCTTTTGCTTCTT
CTTTTTTTCCCTCTGACCTTTTTGTAGCTTTGCTAAACGCTAACGAACATAAATAGTTTG
TAGATATGAAAGCTAGAAACAGGGCCTTTTGCTATGTACAGTCTTCCTGAAAGCAGAGAG
CAGTTCTGGAATGGCAACAACCATCGCCCTGTGTTCTGAAAACTGCAGTAACGTCACTGA
TATGATGTGCAACGCACCTGTCATTTACTAGCTTACTAATTCCGTGCTTGCAATGACAGT
CTGACAGTTGATGCCTGTAATAAGCAAGGTGTTGAACTAACCTACCGAGAGTCCAATACC
ATGAAAACTTTGAGATGTTTTTGGAACATGTATGCTTGCATTGCAGGTCGAAGTGAAATT
TTGGGTGACACAGCTGCACACCTCAATCCAATCGTACACAATAATTATGATGAGGGTAAT
AGTAGATACGTGTTGGTGCTCGTACTACGTGGTGCACACAACACATGAAACGATGTGAAA
CTGAAACTGAAACTGAAGATGCATGGCTCAACCACTAGCACTCGGGGTAGTTGGCGTGAT
TCCTGGAGTAGTCCTGGCAGTAGTAGTAGACC                            
atggacctctgctgcgcccacctcatggccgcgttctgctgcgcgctgag..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........tgctttgcccgctctctctcctcctccgccgccattgccaccgatttgcc
1	OMERI03G00350.1.exon1	212,477	212,704	0	0	228	ATGGCGTCGCGCTCCCGTGGAAGGCGCCTTCCTCCTCCTCATCCGCCGCTCATCCAGGAG TTCCTCGACGACGACCTCTTCGATGTAGAGGTCAACTACAGCGACGAGGAAGAAGAGGAG GAGGAAAGCGATGAAGAGGAGTCGGAGTCGGAGGACAACGAACCGGAGGAGGGGGTGCCG GGGCAGGAGAGTATCGGGGAGGGATGCGGGCCGGCCATACAAGCTAGG
	Intron 1-2	212,705	213,125			421	gtttccagcgccgccgcggagaaga..........atcgtctcttgctactgatttttag
2	OMERI03G00350.1.exon3	213,126	213,215	0	0	90	TGCCCTCAGTGTGGGAAAAGGTTCAGACCTAAGGACATTACCAATCTCTATGCACCAGAG GTCGCAGTTCCAAATAATGATCTGGAAAAG
	Intron 2-3	213,216	213,293			78	gttcgagtttattttgttgccagtt..........aaccggaccctgtttcattcttcag
3	OMERI03G00350.1.exon4	213,294	213,338	0	0	45	GAAGTATTGTATCTAAGGGGGAAAGCTGAATCCCTTGGGGAAACG
	Intron 3-4	213,339	213,425			87	gtacaatttctttgggtcacctcac..........atttttatttttttattgaggatag
4	OMERI03G00350.1.exon5	213,426	213,494	0	0	69	GTGATGAAACATGAGAAATTGATAGAGGAGATGAATGAGAGATTGGTTGAGTTGACAAGT GCTCAGAAG
	Intron 4-5	213,495	213,660			166	gtatgctgtcacctattagtaccat..........tttacttgttatgtgtgccttgcag
5	OMERI03G00350.1.exon6	213,661	213,714	0	0	54	AGGCAGATTCTGTCAGAGCAGAGATTAATGAACGTTGGTAGCTCAAAGAGACAG
	Intron 5-6	213,715	214,673			959	gtaatgccatctaattttaaatttc..........ttcaattgataaccatgttttgtag
6	OMERI03G00350.1.exon7	214,674	214,784	0	0	111	AAAGAATTCTTCATGGATGGACTTCGAGTCATGGCCATAGATGCACTTAACCAAACAATT CTTGCTTCTGGAAAAGCACCAGGCATAGGACAGGAACATGTTCTTTATAAG
	Intron 6-7	214,785	214,888			104	gtacattttttaaatcggtagcttt..........acctttttgcaattcttgtctacag
7	OMERI03G00350.1.exon8	214,889	215,022	0	2	134	TTTAGCATGGTTTCCCATCACGAAGCTCGGAATATACAACTTCCTCTGGATACTAAAACT GTCAGGGACATATGTATCTTACCTAGTGGCTCTGCTATTTTTACATCACTGGGCAGGAAA CTATCATCATTTAG
	Intron 7-8	215,023	215,101			79	gtttgtcttcaatttagtagcctgt..........acactgcacaatattcttaatccag
8	OMERI03G00350.1.exon9	215,102	215,141	2	0	40	CATGACGGCTGACCGTGTCGTTCTTCAGTGTGATTTGCCG
	Intron 8-9	215,142	215,451			310	gtaattatttaaccctgctatcctt..........ctttctctattacaataccatgcag
9	OMERI03G00350.1.exon10	215,452	215,511	0	0	60	TATCCTGGCTGGTCATGTTGTGCGGATGAATCTTCGCGTCAGATTTGTGCTGGATTGCAG
	Intron 9-10	215,512	215,595			84	gttaatcttttagtatctcctgatc..........tgaaccgctttcttatgtactgcag
10	OMERI03G00350.1.exon11	215,596	215,777	0	2	182	AATGGCAATCTTATCATCTTTGATATCCGTCAAACCTCAAGACCGTTGCATTCTATGGTG GGTTTATCTACAACACCGGTTCATACTCTCCATACGGTCATTGATAACAACGGTTCTAGA AAGTTTCTCTCTGCCTCTTCTATAGGCCCCTGCATGTGGGATACTGATGGTAATCAAGGC AG
	Intron 10-11	215,778	215,956			179	gtacgcaaaaaagtactaacagttt..........tgtttgcctttgggctcggttgcag
11	OMERI03G00350.2.exon12	215,957	217,068	2	-	1,112	GCCAAAGTTGCTATTGGGGACAGATAATCAACGGGTGTGCATTTCTCTTGCATGTGCCCC TTCATCAAGTGATCTTTTGGTAGCTTCCTTTCGGCCAAAGGTTGAAACGTCCGAGGATGC TACAGCATCTCAAGTGTATCTATCACAAACACCAACACCCTCTGGTGGAGGCAAATTAGG GTATCATTCCCTCATCAGGAGGGCGGGGAACTCTTCATCCTTCACCGAAGATAGGACATG CAGCACACTTGTGAGCGAAATTCGCATGTCGAAATCCGCAATCATACCTTATGGAAACAA CCAACATCTGTTTGCCTACGGAGATGAGTCGCTGCGTGGGGTCCGGACCTGGCGACTACC TTCGTTTGAGATGCATTCTGATCTCAGCTCCCTCCAGCAACCGGTCCTGGATCTAAGGTA TGCAGAAAGTTCATCAGGAGGGAGGTATCTCGGGTACCTGAGCACGGAAAAGTTGCAGGC TTTCAGAATTAGGTAGCATGTCAGGAGGGAAACTTAATTTTAGGCTAGCTTTTGCTTCTT CTTTTTTTCCCTCTGACCTTTTTGTAGCTTTGCTAAACGCTAACGAACATAAATAGTTTG TAGATATGAAAGCTAGAAACAGGGCCTTTTGCTATGTACAGTCTTCCTGAAAGCAGAGAG CAGTTCTGGAATGGCAACAACCATCGCCCTGTGTTCTGAAAACTGCAGTAACGTCACTGA TATGATGTGCAACGCACCTGTCATTTACTAGCTTACTAATTCCGTGCTTGCAATGACAGT CTGACAGTTGATGCCTGTAATAAGCAAGGTGTTGAACTAACCTACCGAGAGTCCAATACC ATGAAAACTTTGAGATGTTTTTGGAACATGTATGCTTGCATTGCAGGTCGAAGTGAAATT TTGGGTGACACAGCTGCACACCTCAATCCAATCGTACACAATAATTATGATGAGGGTAAT AGTAGATACGTGTTGGTGCTCGTACTACGTGGTGCACACAACACATGAAACGATGTGAAA CTGAAACTGAAACTGAAGATGCATGGCTCAACCACTAGCACTCGGGGTAGTTGGCGTGAT TCCTGGAGTAGTCCTGGCAGTAGTAGTAGACC
	3' downstream sequence						atggacctctgctgcgcccacctcatggccgcgttctgctgcgcgctgag..........

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Transcript: OMERI03G00350.3

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