Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI01G21090.3

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Location

Chromosome 1: 22,366,133-22,376,704 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features and maps to 28 oligo probes.

Gene

This transcript is a product of gene OMERI01G21090 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI01G21090.1	2534	753aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0C4Q6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI01G21090.3	1471	481aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0C4Q8	-
-	OMERI01G21090.2	1456	324aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0C4Q7	-

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Exons

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Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........cacggtgctctataaataagctatacaaggagtagttctgcagaggtgtc
1	OMERI01G21090.1.exon1	22,376,704	22,375,243	-	0	1,462	AGCGGCTGTAACATTTTGGTGTGTCATGGCGCCGGCGGTGCATGCCACTGTCCCGCACGT CGTGCTGCTGGTGAGCCCCGGCGCGGGGCACGTTGTCCCGGCGGCGCAGCTCGCGGCGTG CCTCGCCACGCATCACGGCTGCACGGCCACGATCGTCACGTACACCAACCTCTCCACGGC AAGGAACTCCTCCGCGCTCGCCTCCCTCCCGCGGGGCGTCACCGCCACGGCGCTCCCGGA GGTGTCCCTCGACGACCTCCCCGCCGACGAGCGCATCGAGACGCGCGTCTTCACCGTCGT GCGCCGCACGCTCCCGCACCTCCGTGAGCTCCTGCTCTCCTTCCTCGGCTCATCCCCCGC CGGCGTCACGGCGTTCCTCGCCGACCTCCTCTGTCCCGCGGCGCTCGCCGTGGCGGCCGA GCTCGGCATCCGGCGATACGTCTTCTTCACCTCGAACCTCCTGTGCCTGACCACGCTGCT CTACACCCCGGAGCTCGCCACGACCACCGCCTGCGAGTGCCGCGACCTCCCGGAGCCGGT CGTCCTCCCGGGGTGCGTGCCGCTGCACGGCGCCGACCTCATCGACCCCATACAGGACCG CGCCAACCCCGTGTACCAGCTCATGGTCGAGCTGGGGCTCGACTACCTCCTCGCCGACGG CTTCCTCATCAACACCTTCGACGCCATGGAGCACGACACACTGGTGGCGTTCAACAAGCT TTCCGACGAAGGCGTGTACCCTCCGGCCTACACGGTCGGCCCACTCGTCTGGTCGCCCTC CGTCGAGGCGGCGAACGACGTCTGCATACGGTGGCTCGACGAACAGCCGGACGGATCTGT GCTGTACGTGTGTTTGGGCAGCGGCGGCACGCTGTCCGTCGCGCAGATGGCGGAGCTGGC GGCGGGGCTGGAGGCGAGCGGGCAGAGGTTCCTATGGGTGGTGCGCTTCCCCAGCGACAA GGACGTCAGCGCGAGCTACTTCGGGACGAACGACCGTGGCGACGACGACGACCCGATGAG CTACCTGCCGGAGGGATTCCTCGAGAGGACGAAGGGTACCGGGCTCGCCGTGCCGCTGTG GGCGCCGCAGGTGGAGGTCCTGAACCACCGCGCCGTGGGAGGGTTCTTGTCGCACTGCGG GTGGAACTCGACGCTGGAGGCCGCGTCGGCGGGCGTGCCGATGCTGGCGTGGCCGCTGTT CGCCGAGCAGAGGATGAACGCCGTGATGCTGTCGTCGGAGCGGGTCGGGCTGGCGGTGCG GGTGCGGCCGTCGAGCGCGCGGCCGGACTACGGGGTGGTGCCGCGGGAGGAGGTGGCGTC GGCGGTGAGGAAGCTGATGGTCGGGGAGATGGGTGCGGCGGCACGGAAGAAGGCCGGCGA GCTGCGTGCAGCGGCGGAGATGGCGTCGGCACCGGGTGGACCGCAGCACCAGGCGCTCGC CGGGATGGTCGGCAAGTGGAAG
	Intron 1-2	22,375,242	22,366,142			9,101	gtgcgcggttgatcaccaccccgcg..........accaaaatataagtccacattacag
2	OMERI01G21090.3.exon2	22,366,141	22,366,133	0	0	9	CCCAACTAA
	3' downstream sequence						actaaactaccaccccaaagttgatgaacacgtaaagagaccaacccacc..........

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