Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI11G02470.1

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Location

Chromosome 11: 2,034,389-2,054,651 reverse strand.

About this transcript

This transcript has 35 exons, is annotated with 26 domains and features and maps to 62 oligo probes.

Gene

This transcript is a product of gene OMERI11G02470 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI11G02470.3	6879	1575aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0F2C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI11G02470.2	6665	1575aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0F2C1	-
-	OMERI11G02470.1	6168	1572aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0F2B9	-
-	OMERI11G02470.4	6139	1414aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0F2C2	-
-	OMERI11G02470.5	2808	324aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0F2C3	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	5	77	-	1.10.238.10	-
PANTHER	77	1558	-	PTHR23346	-
Gene3D	574	1058	Armadillo-like helical	1.25.10.10	IPR011989 [Display all genes with this domain]
Gene3D	1059	1560	Armadillo-like helical	1.25.10.10	IPR011989 [Display all genes with this domain]
Superfamily	106	615	Armadillo-type fold	SSF48371	IPR016024 [Display all genes with this domain]
Superfamily	669	1563	Armadillo-type fold	SSF48371	IPR016024 [Display all genes with this domain]
Pfam	407	545	ECM29, ARM-like repeats domain	PF23702	IPR055444 [Display all genes with this domain]
PROSITE patterns	17	29	EF-Hand 1, calcium-binding site	PS00018	IPR018247 [Display all genes with this domain]
PROSITE profiles	4	39	EF-hand domain	PS50222	IPR002048 [Display all genes with this domain]
SMART	8	36	EF-hand domain	SM00054	IPR002048 [Display all genes with this domain]
CDD	8	64	EF-hand domain	cd00051	IPR002048 [Display all genes with this domain]
Pfam	9	64	EF-hand domain	PF13499	IPR002048 [Display all genes with this domain]
PROSITE profiles	40	75	EF-hand domain	PS50222	IPR002048 [Display all genes with this domain]
SMART	44	73	EF-hand domain	SM00054	IPR002048 [Display all genes with this domain]
Superfamily	6	64	EF-hand domain pair	SSF47473	IPR011992 [Display all genes with this domain]
Pfam	1007	1167	Proteasome adapter and scaffold protein ECM29, HEAT-repeat domain	PF24492	IPR055443 [Display all genes with this domain]
Pfam	81	286	Proteasome component Ecm29, N-terminal	PF13001	IPR024372 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	226	233
Seg	451	474
Seg	527	544
Seg	661	672
Seg	1118	1130
Seg	1134	1147
Seg	1248	1253
Seg	1385	1394
Ncoils	534	554

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