Oryza meridionalis (Oryza_meridionalis_v1.3) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 8: 18,363,048-18,364,626 reverse strand.
This transcript has 2 exons, is annotated with 17 domains and features and maps to 23 oligo probes.
This transcript is a product of gene OMERI08G15050 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 88 | 142 | - | SSF57850 | - |
| CDD | 89 | 131 | - | cd16448 | - |
| PANTHER | 1 | 141 | Probable E3 ubiquitin-protein ligase XERICO-like | PTHR47258 | IPR044249 [Display all genes with this domain] |
| SMART | 88 | 131 | Zinc finger, RING-CH-type | SM00744 | IPR011016 [Display all genes with this domain] |
| Pfam | 88 | 131 | Zinc finger, RING-type | PF13639 | IPR001841 [Display all genes with this domain] |
| SMART | 89 | 130 | Zinc finger, RING-type | SM00184 | IPR001841 [Display all genes with this domain] |
| PROSITE profiles | 89 | 131 | Zinc finger, RING-type | PS50089 | IPR001841 [Display all genes with this domain] |
| Gene3D | 77 | 147 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Phobius | 1 | 11 |
| Phobius | 12 | 35 |
| Phobius | 36 | 54 |
| Phobius | 55 | 72 |
| Phobius | 73 | 154 |
| Seg | 56 | 87 |
| TMHMM | 13 | 35 |
| TMHMM | 55 | 72 |
| Alphafold | 1 | 154 |
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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