Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI08G06620.1

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Location

Chromosome 8: 6,884,670-6,886,574 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features and maps to 3 oligo probes.

Gene

This transcript is a product of gene OMERI08G06620 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI08G06620.1	1380	459aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0EJC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	36	141	-	SSF49599	-
Gene3D	284	351	-	1.25.40.420	-
Pfam	289	341	-	PF24570	-
Superfamily	352	447	-	SSF49599	-
PANTHER	353	446	BTB/POZ and MATH domain-containing protein 1-6	PTHR26379	IPR045005 [Display all genes with this domain]
Pfam	173	282	BTB/POZ domain	PF00651	IPR000210 [Display all genes with this domain]
PROSITE profiles	178	247	BTB/POZ domain	PS50097	IPR000210 [Display all genes with this domain]
SMART	178	285	BTB/POZ domain	SM00225	IPR000210 [Display all genes with this domain]
CDD	36	100	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Pfam	352	442	MATH/TRAF domain	PF22486	IPR002083 [Display all genes with this domain]
CDD	352	443	MATH/TRAF domain	cd00121	IPR002083 [Display all genes with this domain]
Gene3D	155	279	SKP1/BTB/POZ domain superfamily	3.30.710.10	IPR011333 [Display all genes with this domain]
Superfamily	160	283	SKP1/BTB/POZ domain superfamily	SSF54695	IPR011333 [Display all genes with this domain]
Gene3D	352	446	TRAF-like	2.60.210.10	IPR008974 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
Seg	130	161
Alphafold	1	459

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