Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI08G05090.1

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Location

Chromosome 8: 4,853,877-4,856,153 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features and maps to 23 oligo probes.

Gene

This transcript is a product of gene OMERI08G05090 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI08G05090.1	887	120aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0EIS6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI08G05090.3	872	120aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0EIS6	-
-	OMERI08G05090.2	707	120aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0EIS6	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	118	-	3.10.20.90	-
CDD	12	114	-	cd16128	-
PANTHER	4	117	Autophagy protein Atg8 ubiquitin-like	PTHR10969	IPR004241 [Display all genes with this domain]
Pfam	14	117	Autophagy protein Atg8 ubiquitin-like	PF02991	IPR004241 [Display all genes with this domain]
Superfamily	3	117	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	20
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120
Alphafold	1	120

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