Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: OMERI07G02320.4

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Location

Chromosome 7: 2,216,330-2,230,284 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 13 domains and features and maps to 31 oligo probes.

Gene

This transcript is a product of gene OMERI07G02320 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	OMERI07G02320.5	4300	953aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OMERI07G02320.3	4178	953aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M6	-
-	OMERI07G02320.2	4032	953aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M6	-
-	OMERI07G02320.6	3891	953aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M6	-
-	OMERI07G02320.7	3840	375aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M7	-
-	OMERI07G02320.8	3804	376aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M8	-
-	OMERI07G02320.1	3771	866aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M1	-
-	OMERI07G02320.4	3717	848aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M4	-
-	OMERI07G02320.9	3647	953aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0E7M6	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	254	488	-	3.90.70.10	-
Superfamily	262	762	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
Pfam	264	612	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PF00443	IPR001394 [Display all genes with this domain]
PANTHER	154	761	Ubiquitin carboxyl-terminal hydrolase	PTHR21646	IPR050185 [Display all genes with this domain]
PROSITE profiles	264	591	Ubiquitin specific protease domain	PS50235	IPR028889 [Display all genes with this domain]
PROSITE patterns	265	280	Ubiquitin specific protease, conserved site	PS00972	IPR018200 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	22
MobiDBLite	620	649
Seg	2	31
Seg	55	67
Seg	86	101
Alphafold	1	848
Ncoils	843	848

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