Oryza meridionalis (Oryza_meridionalis_v1.3)
Location
About this transcript

This transcript has 16 exons and is annotated with 30 domains and features.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-OMERI04G14430.13591589aa
 
Protein coding
A0A0E0DFL0 Ensembl Canonical
-OMERI04G14430.23537571aa
 
Protein coding
A0A0E0DFL1 -
-OMERI04G14430.33513563aa
 
Protein coding
A0A0E0DFL2 -

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily129215-SSF57850-
CDD131192-cd23141-
Superfamily203272-SSF57850-
CDD211274-cd20346-
Gene3D261516-1.20.120.1750-
Superfamily284332-SSF57850-
Pfam287327-PF22191-
CDD288342-cd22583-
Gene3D554589-4.10.1060.10-
Pfam352556Ariadne domainPF19422IPR045840 [Display all genes with this domain]
PANTHER82422E3 ubiquitin ligase RBR familyPTHR11685IPR031127 [Display all genes with this domain]
Pfam68107E3 ubiquitin-protein ligase ARIH1-like, UBA-like domainPF21235IPR048962 [Display all genes with this domain]
Pfam203265IBR domainPF01485IPR002867 [Display all genes with this domain]
SMART203265IBR domainSM00647IPR002867 [Display all genes with this domain]
SMART278339IBR domainSM00647IPR002867 [Display all genes with this domain]
PROSITE profiles130343TRIAD supradomainPS51873IPR044066 [Display all genes with this domain]
PROSITE profiles134178Zinc finger, RING-typePS50089IPR001841 [Display all genes with this domain]
Gene3D128217Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
PROSITE profiles561589Zinc finger, RanBP2-typePS50199IPR001876 [Display all genes with this domain]
SMART563587Zinc finger, RanBP2-typeSM00547IPR001876 [Display all genes with this domain]
PROSITE patterns565584Zinc finger, RanBP2-typePS01358IPR001876 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite118
MobiDBLite146
MobiDBLite3046
MobiDBLite517562
MobiDBLite526554
Seg517
Seg2047
Seg526558
Alphafold1589